Job Description P36995 Confidence 36.82% Date Thu Jan 5 11:54:08 GMT 2012 Rank 68 Aligned Residues 51 % Identity 24% Template c2pmzE_ PDB info PDB header:translation, transferase Chain: E: PDB Molecule:dna-directed rna polymerase subunit e; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus Resolution 3.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	N	K	M	T	G	L	V	K	W	F	N	A	D	K	G	F	G	F	I	S	P	V	D	G	S	K	D	V	F	V	H	F	S	A	I	Q	N	D	N	Y	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	E	G	Q	K	V	T	F	S	I
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.										.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.										.
Template Sequence		V	Q	E	V	V	E	G	E	V	L	Q	V	D	N	.	.	.	Y	G	I	F	V	N	L	G	P	.	M	D	G	L	V	H	I	S	Q	I	T	D	D	T	L	K	Y	D	N	V	R	G	I	I	F	G	E	K	S	K	K	V	I	Q	K	G	D	K	V	R	A	R	V
Template Known Secondary structure		S	S												S	.	.	.	S							S	S	.	S						S	T	T	T		S	S					B	T	T	T	T	B				S	S	S						T	T
Template Predicted Secondary structure																.	.	.										.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions