Job Description P36995 Confidence 28.35% Date Thu Jan 5 11:54:08 GMT 2012 Rank 82 Aligned Residues 52 % Identity 27% Template c2b8kG_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kda PDBTitle: 12-subunit rna polymerase ii Resolution 4.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.															.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	N	K	M	T	G	L	V	K	W	F	N	A	D	K	G	F	G	F	I	S	P	V	D	G	S	K	D	V	F	V	H	F	S	A	I	Q	N	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	T	L	F	E	G	Q	K	V	T	F	S	I	E
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.								.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.								.
Template Sequence		K	G	E	V	V	D	G	T	V	V	S	C	S	Q	.	.	.	H	G	F	E	V	Q	V	.	G	P	M	K	V	F	V	T	K	H	L	M	P	Q	D	L	T	F	N	A	G	S	N	P	P	S	Y	Q	S	S	E	D	V	I	T	I	K	S	R	I	R	V	K	I	E
Template Known Secondary structure		T	T												T	.	.	.	T							.	T	T	S						G	G	G	S		S	S				B	S	S		S	S						S	S					T	T
Template Predicted Secondary structure																.	.	.								.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions