Job Description P36995 Confidence 26.00% Date Thu Jan 5 11:54:08 GMT 2012 Rank 87 Aligned Residues 67 % Identity 7% Template c2asbA_ PDB info PDB header:transcription/rna Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: structure of a mycobacterium tuberculosis nusa-rna complex Resolution 1.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		M	S	N	K	M	T	G	L	V	K	W	F	N	A	D	K	G	F	G	F	I	S	P	V	D	G	.	.	.	.	S	K	D	V	F	V	H	F	S	A	I	Q	N	D	N	Y	R	T	L	F	E	G	Q	K	V	T	F	S	I	E	S	G	A	K	G	P	A	A	A	N	V	I	I
Query Conservation																												.	.	.	.
Alig confidence																												.	.	.	.															.	.
Template Conservation																																														.	.
Template Sequence		E	G	E	I	V	A	G	V	I	Q	R	D	S	R	A	N	A	R	G	L	V	V	V	R	I	G	T	E	T	K	A	S	E	G	V	I	P	A	A	E	Q	V	P	G	.	.	E	S	Y	E	H	G	N	R	L	R	C	Y	V	V	G	V	T	R	G	A	R	E	P	L	I	T	L
Template Known Secondary structure		T	T																T	T								S	S	S	S								G	G	G	S		T	T	.	.					T	T														S	S	S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions