Job Description P76090 Confidence 2.80% Date Thu Jan 5 12:18:43 GMT 2012 Rank 32 Aligned Residues 92 % Identity 9% Template c3ppbB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative tetr family transcription regulator; PDBTitle: crystal structure of a putative tetr family transcription regulator2 (shew_3104) from shewanella sp. pv-4 at 2.10 a resolution Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	L	F	Q	S	L	L	R	P	T	M	F	W	L	Y	K	H	H	V	T	A	N	H	I	T	L	A	A	L	A	L	S	L	L	T	G	L	L	L	M	L	A	A	Q	P	I	L	F	L	L	L	P	I	V	L	F	I	R	M	A	L	N	A	L	D	G	M	L	A	R	E	C	N	Q	Q	T	R	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	K	K	Q	A	I	L	E	T	A	L	Q	L	F	V	S	Q	G	F	H	G	T	S	T	A	T	I	A	R	E	A	G	V	A	T	G	T	L	F	H	H	F	P	S	K	E	Q	L	L	E	Q	L	F	L	G	V	K	Q	E	F	A	D	A	I	Q	A	S	V	S	S	R	G	D	L	K	Q	D	A	E
Template Known Secondary structure																			T		S	T	T	S										T											S	S																							T					S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	L	N	E	T	G	D	V	I	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	W	F	A	A	L	T	W	A	X	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions