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Job DescriptionP15047
Confidence100.00%DateThu Jan 5 11:34:27 GMT 2012
Rank24Aligned Residues240
% Identity34%Templatec3uxyC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: the crystal structure of short chain dehydrogenase from rhodobacter2 sphaeroides
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGI
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Template Sequence  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA. DLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGV
Template Known Secondary structure 
TT
SSTTSTT

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TT


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   4.....10.........20.........30.........40..... ....50.........60.........70.........80..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  LRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLEL
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Template Sequence  ISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCXGXDH
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B
GGG

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B

TTB
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  AGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDG
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Template Sequence  APQGIRINAVCPNEVNTPXLRTGFAKRGFD. . . PDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNG
Template Known Secondary structure  GGGTSSB

TTT

...TTSTTSS
B
SGGGTT
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T
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   163......170.........180.........190.. .......200.........210.........220.........230.........
 
   243...
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Query Sequence  GSTL
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Template Sequence  GKAV
Template Known Secondary structure  T


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   240...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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