Job Description P15047 Confidence 100.00% Date Thu Jan 5 11:34:27 GMT 2012 Rank 16 Aligned Residues 237 % Identity 26% Template c3r3sD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase; PDBTitle: structure of the ygha oxidoreductase from salmonella enterica Resolution 1.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.													.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	F	S	G	K	N	V	W	V	T	G	A	G	K	G	I	G	Y	A	T	A	L	A	F	V	E	A	G	A	K	V	T	G	F	D	Q	A	F	T	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	P	F	A	T	E	V	M	D	V	A	D	A	A	Q	V	A	Q	V	C	Q	R	L	L	A	E
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	K	D	R	K	A	L	V	T	G	G	D	S	G	I	G	R	A	A	A	I	A	Y	A	R	E	G	A	D	V	A	I	N	Y	L	P	A	E	E	E	D	A	Q	Q	V	K	A	L	I	E	E	C	G	R	K	A	V	L	L	P	G	D	L	S	D	E	S	F	A	R	S	L	V	H	K	A	R	E	A
Template Known Secondary structure		T	T	T	T							T	T	T	S													T	T									G	G	G														T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	R	L	D	A	L	V	N	A	A	G	I	L	R	M	G	A	T	D	Q	L	S	K	E	D	W	Q	Q	T	F	A	V	N	V	G	G	A	F	N	L	F	Q	Q	T	M	N	Q	F	R	R	Q	R	G	G	A	I	V	T	V	A	S	D	A	A	H	T	P	R	I	G	M	S	A	Y	G	A	S	K	A
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		L	G	G	L	D	I	L	A	L	V	A	G	K	Q	T	A	I	P	E	I	K	D	L	T	S	E	Q	F	Q	Q	T	F	A	V	N	V	F	A	L	F	W	I	T	Q	E	A	I	P	.	L	L	P	K	G	A	S	I	I	T	T	S	S	I	Q	A	Y	Q	P	S	P	H	L	L	D	Y	A	A	T	K	A
Template Known Secondary structure			T																S	S	G	G	G														T											G	G	.	G			T	T									G	G	G	T	S			T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	S	L	A	L	S	V	G	L	E	L	A	G	S	G	V	R	C	N	V	V	S	P	G	S	T	D	T	D	M	Q	R	T	L	W	V	S	D	D	A	E	E	Q	R	I	R	G	F	G	E	Q	F	K	L	G	I	P	L	G	K	I	A	R	P	Q	E	I	A	N	T	I	L	F	L	A	S	D	L
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.
Template Sequence		A	I	L	N	Y	S	R	G	L	A	K	Q	V	A	E	K	G	I	R	V	N	I	V	A	P	G	P	I	W	T	A	L	Q	I	S	G	G	Q	T	Q	D	K	.	.	.	.	.	.	.	.	I	P	Q	F	G	Q	Q	T	P	M	K	R	A	G	Q	P	A	E	L	A	P	V	Y	V	Y	L	A	S	Q	E
Template Known Secondary structure															G	G	G	T										S	B							T	T	T	S		G	G	G	.	.	.	.	.	.	.	.	S	T	T	T	T	T	T	S	T	T	S	S		B		G	G	G	G									S	G	G
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.									.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	H	I	T	L	Q	D	I	V	V	D	G	G	S	T	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	Y	V	T	A	E	V	H	G	V	C	G	G	E	H	L	G
Template Known Secondary structure		G	T	T			S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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