Job Description P15047 Confidence 98.77% Date Thu Jan 5 11:34:27 GMT 2012 Rank 258 Aligned Residues 181 % Identity 19% Template c3qvoA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nmra family protein; PDBTitle: structure of a rossmann-fold nad(p)-binding family protein from2 shigella flexneri. Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.															.	.	.	.
Query SS confidence																											.															.	.	.	.
Query Sequence		S	G	K	N	V	W	V	T	G	A	G	K	G	I	G	Y	A	T	A	L	A	F	V	E	A	.	G	A	K	V	T	G	F	D	Q	A	F	T	Q	E	.	.	.	.	Q	Y	P	F	A	T	E	V	M	D	V	A	D	A	A	Q	V	A	Q	V	C	Q	R	L	L	A	E	T	E	R	L	D	A	L	V	N
Query Conservation																											.															.	.	.	.
Alig confidence																											.															.	.	.	.																														.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		H	X	K	N	V	L	I	L	G	A	G	G	Q	I	A	R	H	V	I	N	Q	L	A	D	K	Q	T	I	K	Q	T	L	F	A	R	Q	P	A	K	I	H	K	P	Y	P	T	N	S	Q	I	I	X	G	D	V	L	N	H	A	A	L	K	Q	A	X	Q	G	Q	D	I	V	Y	A	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T	S											T	T		T	T								S	S	G	G	G	S		S	S			T	T								T	T										T	T		S					.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	I	L	R	M	G	A	T	D	Q	L	S	K	E	D	W	Q	Q	T	F	A	V	N	V	G	G	A	F	N	L	F	Q	Q	T	M	N	Q	F	R	R	Q	R	G	G	A	I	V	T	V	A	S	D	A	A	H	T	P	R	I	G	M	S	A	Y	G	A	S	K	A	A	L	K	S	L	A	L	S	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.																				.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.																				.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	T	G	E	D	L	D	I	Q	A	N	S	V	I	A	A	X	K	A	C	D	V	K	R	L	I	F	V	L	S	.	.	.	.	.	.	.	L	G	I	G	E	P	L	K	P	F	R	R	A	A	D	A	I	E	A	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T															T	T										.	.	.	.	.	.	.					G	G	G												T	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.																				.
Template SS confidence
																								73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	E	L	A	G	S	G	V	R	C	N	V	V	S	P	G	S	T	D	T	D	M	Q	R	T	L	W	V	S	D	D	A	E	E	Q	R	I	R	G	F	G	E	Q	F	K	L	G	I	P	L	G	K	I	A	R	P	Q	E	I	A	N	T	I	L	F	L	A	S	D	L	A	S	H	I	T	L	Q	D	I
Query Conservation
Alig confidence		.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		.	.	.	.	.	.	S	G	L	E	Y	T	I	L	R	P	A	W	L	T	D	E	D	I	I	D	Y	E	L	T	S	R	N	E	P	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	I	V	S	R	K	S	V	A	A	L	I	T	D	I	I	D	K	P	E	K	H	.	I	G	E	N	I
Template Known Secondary structure		.	.	.	.	.	.	S		S														S									T	T	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S																	S	T	T	T	T	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
								139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.															170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.
		239	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	N	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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