Job Description P15047 Confidence 99.54% Date Thu Jan 5 11:34:27 GMT 2012 Rank 204 Aligned Residues 204 % Identity 16% Template c3nzoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-n-acetylglucosamine 4,6-dehydratase; PDBTitle: udp-n-acetylglucosamine 4,6-dehydratase from vibrio fischeri. Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.															.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	G	K	N	V	W	V	T	G	A	G	K	G	I	G	Y	A	T	A	L	A	F	V	E	A	G	.	A	K	V	T	G	F	D	Q	A	F	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	Y	P	F	A	T	E	V	M	D	V	A	D	A	A	Q	V	A	Q	V	C	Q	R	L	L
Query Conservation																													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.
Template Sequence		V	S	Q	S	R	F	L	V	L	G	G	A	G	S	I	G	Q	A	V	T	K	E	I	F	K	R	N	P	Q	K	L	H	V	V	D	I	S	E	N	N	X	V	E	L	V	R	D	I	R	S	S	F	G	Y	I	N	G	D	F	Q	T	F	A	L	D	I	G	S	I	E	Y	D	A	F	.	.	.	.	.	I
Template Known Secondary structure				T							T	T	T	S												T	T			S							S																				S	S									T	T	S							.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	E	R	L	D	A	L	V	N	A	A	G	I	L	R	M	G	A	T	D	Q	L	S	K	E	D	W	Q	Q	T	F	A	V	N	V	G	G	A	F	N	L	F	Q	Q	T	M	N	Q	F	R	R	Q	R	G	G	A	I	V	T	V	A	S	D	A	A	H	T	P	R	I	G	M	S	A	Y	G	A	S
Query Conservation
Alig confidence																					.	.	.	.	.	.																																															.	.	.
Template Conservation																					.	.	.	.	.	.																																															.	.	.
Template Sequence		K	A	D	G	Q	Y	D	Y	V	L	N	L	S	A	L	K	H	V	R	.	.	.	.	.	.	S	E	K	D	P	F	T	L	X	R	X	I	D	V	N	V	F	N	T	D	K	T	I	Q	Q	S	I	D	A	G	A	K	K	Y	F	C	V	S	T	D	K	A	A	N	P	V	.	.	.	N	X	X	G	A	S
Template Known Secondary structure								S											G	G	.	.	.	.	.	.	G	G	S	S												T													T	T		S								S		S	S				.	.	.	S
Template Predicted Secondary structure																					.	.	.	.	.	.																																															.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		K	A	A	L	K	S	L	A	L	S	V	G	L	E	L	A	G	S	G	V	R	C	N	V	V	S	P	G	S	T	D	T	D	M	Q	R	T	L	W	V	S	D	D	A	E	E	Q	R	I	R	G	F	G	E	Q	F	K	L	G	I	P	L	G	K	.	I	A	R	P	Q	E	I	A	N	T	I	L	F	L	A
Query Conservation																																																																		.
Alig confidence													.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation													.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	I	X	E	X	F	L	X	R	K	.	.	.	.	.	S	E	E	I	A	I	S	T	A	R	F	A	N	V	A	F	S	D	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	Q	K	N	Q	P	I	K	R	Y	F	V	T	P	Q	E	S	G	E	L	C	L	X	S	C
Template Known Secondary structure													.	.	.	.	.	T	T	T	S										B	T	T		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T								B
Template Predicted Secondary structure													.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	A	S	H	I	T	L	Q	D	I	V	V	D	G	G	S	T	L
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	I	F	G	E	N	R	D	I	F	F	P	K	D	X	A	R	F
Template Known Secondary structure		.	.	.					T	T									S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions