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Job DescriptionP15047
Confidence100.00%DateThu Jan 5 11:34:27 GMT 2012
Rank26Aligned Residues236
% Identity25%Templatec3ijrF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: 2.05 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex3 with nad+
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.. .......50.........60.........70
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Query Sequence  DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE. . . . . . . . . . . QYPFATEVMDVADAAQVAQVCQRLLAET
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Template Sequence  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL
Template Known Secondary structure  TTTT
TTTSTT
SS
TTTS
S
TTS
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   41........50.........60.........70.........80.........90.........100.........110.........120
 
   71........80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAA
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Template Sequence  GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH. LKQGDVIINTASIVAYEGNETLIDYSATKGA
Template Known Secondary structure  S










SSGGG

TTT.

TT


T

TT
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   121........130.........140.........150.........160........ .170.........180.........190.........
 
   151........160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLA
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Template Sequence  IVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD. . . . . . . . . EKKVSQFGSNVPXQRPGQPYELAPAYVYLASSDS
Template Known Secondary structure  GGGT

SB
STTTTTTS
.........TTTTTTSTTSS
B
GGGTSGGG
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   200.........210.........220.........230...... ...240.........250.........260.........270
 
   231........240.......
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Query Sequence  SHITLQDIVVDGGSTLG
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Template Sequence  SYVTGQXIHVNGGVIVN
Template Known Secondary structure  TT

S
SSS



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   271........280.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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