Job Description P15047 Confidence 100.00% Date Thu Jan 5 11:34:27 GMT 2012 Rank 140 Aligned Residues 217 % Identity 22% Template c3gemC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of short-chain dehydrogenase from pseudomonas2 syringae Resolution 1.83 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		K	N	V	W	V	T	G	A	G	K	G	I	G	Y	A	T	A	L	A	F	V	E	A	G	A	K	V	T	G	F	D	Q	A	F	T	Q	E	.	.	.	.	.	Q	Y	P	F	A	T	E	V	M	D	V	A	D	A	A	Q	V	A	Q	V	C	Q	R	L	L	A	E	T	E	R	L	D	A	L	V	N	A	A
Query Conservation																																							.	.	.	.	.
Alig confidence																																							.	.	.	.	.
Template Conservation
Template Sequence		A	P	I	L	I	T	G	A	S	Q	R	V	G	L	H	C	A	L	R	L	L	E	H	G	H	R	V	I	I	S	Y	R	T	E	H	A	S	V	T	E	L	R	Q	A	G	A	V	A	L	Y	G	D	F	S	C	E	T	G	I	X	A	F	I	D	L	L	K	T	Q	T	S	S	L	R	A	V	V	H	N	A
Template Known Secondary structure							T	T	T	T	S													T	T								S	S											T	T									S	S																S			S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	L	R	M	G	A	T	D	Q	L	S	K	E	D	W	Q	Q	T	F	A	V	N	V	G	G	A	F	N	L	F	Q	Q	T	M	N	Q	F	R	R	Q	R	G	G	A	I	V	T	V	A	S	D	A	A	H	T	P	R	I	G	M	S	A	Y	G	A	S	K	A	A	L	K	S	L	A	L	S	V	G	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	S	E	W	L	A	E	T	P	G	E	E	A	D	N	F	T	R	X	F	S	V	H	X	L	A	P	Y	L	I	N	L	H	C	E	P	L	L	T	A	S	E	V	A	D	I	V	H	I	S	D	D	V	T	R	K	G	S	S	K	H	I	A	Y	C	A	T	K	A	G	L	E	S	L	T	L	S	F	A	A
Template Known Secondary structure		.								T	T														T																T	S	S	S									G	G	G	G	T			S	S
Template Predicted Secondary structure		.
Template SS confidence
			86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	G	S	G	V	R	C	N	V	V	S	P	G	S	T	D	T	D	M	Q	R	T	L	W	V	S	D	D	A	E	E	Q	R	I	R	G	F	G	E	Q	F	K	L	G	I	P	L	G	K	I	A	R	P	Q	E	I	A	N	T	I	L	F	L	A	S	D	L	A	S	H	I	T	L	Q	D	I	V	V
Query Conservation
Alig confidence							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		R	F	A	P	L	.	V	K	V	N	G	I	A	P	A	L	A	A	Y	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	L	A	K	S	A	L	G	I	E	P	G	A	E	V	I	Y	Q	S	L	R	Y	L	L	D	.	.	S	T	Y	V	T	G	T	T	L	T	V
Template Known Secondary structure				T	T	T	.	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S						T													.	.		S	S			S
Template Predicted Secondary structure							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
		165	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.
		241	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	G	S	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	G	G	R	H	V
Template Known Secondary structure		S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions