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Job DescriptionP15047
Confidence100.00%DateThu Jan 5 11:34:27 GMT 2012
Rank112Aligned Residues227
% Identity24%Templatec3f9iB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase2 rickettsia prowazekii
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAA
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Template Sequence  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKS. . . . . . . . . LGNALKDNYTIEVCNLANKEECSNLIS
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TT
TTTTSTT
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   2.......10.........20.........30.........40..... ....50.........60.........70..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  GILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL
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Template Sequence  KTSNLDILVCNAGITDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIGNPGQANYCASKAGLIGMTKSLSY
Template Known Secondary structure  T
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   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVV
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Template Sequence  EVATRGITVNAVAPGFIKSDMTDKL. . . . . . . . . . NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHV
Template Known Secondary structure  GGGT
SB

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T
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B
SGGGTT

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   165....170.........180......... 190.........200.........210.........220.........230....
 
   241.....
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Query Sequence  DGGSTL
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Template Sequence  NGGMLM
Template Known Secondary structure  STTSS
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   235....240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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