Return to main results Retrieve Phyre Job Id

Job DescriptionP15047
Confidence100.00%DateThu Jan 5 11:34:27 GMT 2012
Rank83Aligned Residues231
% Identity25%Templatec3bmrA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:pteridine reductase; PDBTitle: structure of pteridine reductase 1 (ptr1) from trypanosoma2 brucei in ternary complex with cofactor (nadp+) and3 inhibitor (compound ax6)
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40... ......50.........60.........70..
Predicted Secondary structure 













...........















Query SS confidence 







































. . . . . . . . . . .




























Query Sequence  SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ. . . . . . . . . . . YPFATEVMDVADAAQVAQVCQRLLAETER
Query Conservation   

 






 


  

  
   

 
    
      ...........        

                   
Alig confidence 







































...........




























Template Conservation 










 


 
 
  

  

 


  
                         
                    
Template Sequence  EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVQADLTNSNVLPASCEEIINSCFR
Template Known Secondary structure 


TTTTSTT


SS
STT





S
STT
Template Predicted Secondary structure 


























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   73......80.........90.........100.........110...... ...120.........130.........140.........150
Predicted Secondary structure 






































..















Query SS confidence 











































. .

































Query Sequence  LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMN. . QFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAA
Query Conservation                                              ..              
            
  

 
Alig confidence 











































..

































Template Conservation                                                             

              


  
Template Sequence  AFGRCDVLVNNASAFYPTPLVGKTVETQVAELIGTNAIAPFLLTMSFAQRQSNLSIVNLCDAMVDQPCMAFSLYNMGKHA
Template Known Secondary structure  S
















TT





TTTTS

TT
Template Predicted Secondary structure 
































































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   151........160.........170.........180.........190.........200.........210 .........220.........
Predicted Secondary structure 


























.




Query SS confidence 



























































.


















Query Sequence  LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLG. KIARPQEIANTILFLASDL
Query Conservation          
 
     
 

 
 

 
 
                            
  .
   
 


  
  
 
  
Alig confidence 
































............














.


















Template Conservation          
       
 

 
 

 
 
    ............            
   
   




  
 

 
  
Template Sequence  LVGLTQSAALELAPYGIRVNGVAPGVSLLPVAM. . . . . . . . . . . . GEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGS
Template Known Secondary structure  GGGT
SS
S

SSS............
TT
TTTSS


SGG
Template Predicted Secondary structure 
















............











Template SS confidence 















































































   181........190.........200.........210... ......220.........230.........240........
 
   230.........240......
Predicted Secondary structure 











Query SS confidence 
















Query Sequence  ASHITLQDIVVDGGSTL
Query Conservation 
  


  
 



  
Alig confidence 
















Template Conservation 
  


  
 



  
Template Sequence  AQYITGSIIKVDGGLSL
Template Known Secondary structure  GTT

S
STTGGG
Template Predicted Secondary structure 









Template SS confidence 
















   249250.........260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions