Return to main results Retrieve Phyre Job Id

Job DescriptionP15047
Confidence100.00%DateThu Jan 5 11:34:27 GMT 2012
Rank5Aligned Residues246
% Identity31%Templatec3ak4C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nadh-dependent quinuclidinone reductase; PDBTitle: crystal structure of nadh-dependent quinuclidinone reductase from2 agrobacterium tumefaciens
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50.........60.........70...
Predicted Secondary structure 














.......


















Query SS confidence 








































. . . . . . .































Query Sequence  MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ. . . . . . . EQYPFATEVMDVADAAQVAQVCQRLLAETERL
Query Conservation 
 
 

 






 


  

  
   

 
    
    .......          

                    
Alig confidence 








































.......































Template Conservation    
 

 






 


 
 
  

  
  


  
           
                               
Template Sequence  FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGF
Template Known Secondary structure  T

TT
TTTSTT
S
T
TT


TT
TS
Template Predicted Secondary structure 































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   74.....80.........90.........100.........110...... ...120.........130.........140.........150..
Predicted Secondary structure 





































.















Query SS confidence 










































.



































Query Sequence  DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMN. QFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALK
Query Conservation                                             .              
            
  

 
  
Alig confidence 










































.



































Template Conservation                                                            
            
 


    
Template Sequence  DLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVF
Template Known Secondary structure 









GGG

TT




GGGTS

TT
Template Predicted Secondary structure 


















































Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   153......160.........170.........180.........190.... .....200.........210.........220.........230.
Predicted Secondary structure 





















.










Query SS confidence 









































.




































Query Sequence  SLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQ. RIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLAS
Query Conservation        
 
     
 

 
 

 
 
               .             
  
   
 


  
  
 
  
 
Alig confidence 









































.




































Template Conservation        
       
 
  
 

 
 
                             
  
   
 


  
  
 
  
 
Template Sequence  GWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAAR
Template Known Secondary structure  GGGT

SB
ST

T
TT
S
B
SGGGT
Template Predicted Secondary structure 





























Template SS confidence 















































































   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   232.......240......
Predicted Secondary structure 










Query SS confidence 














Query Sequence  HITLQDIVVDGGSTL
Query Conservation   


  
 



  
Alig confidence 














Template Conservation   


  
 



  
Template Sequence  FMTGQGINVTGGVRM
Template Known Secondary structure  T

S
SSSSS
Template Predicted Secondary structure 








Template SS confidence 














   245....250.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions