Job Description P15047 Confidence 98.44% Date Thu Jan 5 11:34:27 GMT 2012 Rank 281 Aligned Residues 186 % Identity 16% Template c2zklA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:capsular polysaccharide synthesis enzyme cap5f; PDBTitle: crystal structure of capsular polysaccharide assembling protein capf2 from staphylococcus aureus Resolution 2.61 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	W	V	T	G	A	G	K	G	I	G	Y	A	T	A	L	A	F	V	E	A	G	A	K	V	T	G	F	D	Q	A	F	T	Q	E	Q	Y	P	F	A	T	E	V	M	D	V	A	D	A	A	Q	V	A	Q	V	C	Q	R	L	L	A	E	T	E	R	L	D	A	L	V	N	A	A	G	I	L	R	M	G
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		N	I	V	I	T	G	A	K	G	F	V	G	K	N	L	K	A	D	L	T	S	T	T	D	H	H	I	F	E	V	H	R	Q	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	E	L	E	S	A	L	L	K	A	D	F	I	V	H	L	A	G	V	.	.	.	.
Template Known Secondary structure							T	T	T	S																							T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S									.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	D	Q	L	S	K	E	D	W	Q	Q	T	F	A	V	N	V	G	G	A	F	N	L	F	Q	Q	T	M	N	Q	F	R	R	Q	R	G	G	A	I	V	T	V	A	S	D	A	A	H	T	P	R	I	G	M	S	A	Y	G	A	S	K	A	A	L	K	S	L	A	L	S	V	G	L	E	L	A	G	S	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.																						.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.																						.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	L	G	N	V	S	Y	L	D	H	V	L	D	I	L	T	R	N	T	K	K	P	A	I	L	L	S	S	S	I	Q	A	T	Q	D	.	.	.	N	P	Y	G	E	S	K	L	Q	G	E	Q	L	L	R	E	Y	A	E	E	Y	.	.	.	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S													T	T		S	S										G	G	G	T	S		.	.	.	S																					.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.																						.	.	.
Template SS confidence
																		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210									.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.
Query Sequence		V	R	C	N	V	V	S	P	G	S	T	D	T	D	M	Q	R	T	L	W	V	S	D	D	A	E	E	Q	R	I	R	G	F	G	E	Q	F	K	L	G	I	P	L	G	.	.	.	.	.	.	.	.	K	I	A	R	P	Q	E	I	A	N	T	I	L	F	L	A	S	D	L	A	S	H	I	T	L	Q	D	I
Query Conservation																																														.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.																				.
Template Conservation																								.	.	.	.	.	.																																												.
Template Sequence		N	T	V	Y	I	Y	R	W	P	N	L	F	G	K	W	C	K	P	N	Y	N	S	.	.	.	.	.	.	V	I	A	T	F	C	Y	K	I	A	R	N	E	E	I	Q	V	N	D	R	N	V	E	L	T	L	N	Y	V	D	D	I	V	A	E	I	K	R	A	I	E	G	T	.	P	T	I	E	N	G	V	P
Template Known Secondary structure															T	T			T	T	T	T		.	.	.	.	.	.										T	T	T						S		T	T																			T	T	T		.					T	T
Template Predicted Secondary structure																								.	.	.	.	.	.																																												.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.
		239	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	D	G	G	S	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	P	N	V	F	K	V
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions