Job Description P15047 Confidence 100.00% Date Thu Jan 5 11:34:27 GMT 2012 Rank 96 Aligned Residues 238 % Identity 32% Template c2wdzD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:short-chain dehydrogenase/reductase; PDBTitle: crystal structure of the short chain dehydrogenase2 galactitol-dehydrogenase (gatdh) of rhodobacter3 sphaeroides in complex with nad+ and 1,2-pentandiol Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.
Query Sequence		M	D	F	S	G	K	N	V	W	V	T	G	A	G	K	G	I	G	Y	A	T	A	L	A	F	V	E	A	G	A	K	V	T	G	F	D	Q	A	F	T	Q	E	.	.	.	.	.	.	.	Q	Y	P	F	A	T	E	V	M	D	V	A	D	A	A	Q	V	A	Q	V	C	Q	R	L	L	A	E	T	E	R	L
Query Conservation																																												.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	L	D	G	A	C	A	A	V	T	G	A	G	S	G	I	G	L	E	I	C	R	A	F	A	A	S	G	A	R	L	I	L	I	D	R	E	A	A	A	L	D	R	A	A	Q	E	L	G	A	A	V	A	A	R	I	V	A	D	V	T	D	A	E	A	M	T	A	A	A	A	E	A	E	A	V	A	P	V
Template Known Secondary structure		T			T	T							T	T	T	S													T	T								S													G	G	G									T	T																S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		D	A	L	V	N	A	A	G	I	L	R	M	G	A	T	D	Q	L	S	K	E	D	W	Q	Q	T	F	A	V	N	V	G	G	A	F	N	L	F	Q	Q	T	M	N	Q	F	R	R	Q	R	G	G	A	I	V	T	V	A	S	D	A	A	H	T	P	R	I	G	M	S	.	.	A	Y	G	A	S	K	A	A	L
Query Conservation																																																																							.	.
Alig confidence																																																																							.	.
Template Conservation
Template Sequence		S	I	L	V	N	S	A	G	I	A	R	L	H	D	A	L	E	T	D	D	A	T	W	R	Q	V	M	A	V	N	V	D	G	M	F	W	A	S	R	A	F	G	R	A	M	V	A	R	G	A	G	A	I	V	N	L	G	S	M	S	G	T	I	V	N	R	P	Q	F	A	S	S	Y	M	A	S	K	G	A	V
Template Known Secondary structure														B		G	G	G														T																	T	T										G	G	G	T	S			S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	L	A	L	S	V	G	L	E	L	A	G	S	G	V	R	C	N	V	V	S	P	G	S	T	D	T	D	M	Q	R	T	L	W	V	S	D	D	A	E	E	Q	R	I	R	G	F	G	E	Q	F	K	L	G	I	P	L	G	K	I	A	R	P	Q	E	I	A	N	T	I	L	F	L	A	S	D	L	A	S
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.
Template Sequence		H	Q	L	T	R	A	L	A	A	E	W	A	G	R	G	V	R	V	N	A	L	A	P	G	Y	V	A	T	E	M	T	L	K	M	R	E	R	.	.	.	.	.	.	.	.	P	E	L	F	E	T	W	L	D	M	T	P	M	G	R	C	G	E	P	S	E	I	A	A	A	A	L	F	L	A	S	P	A	A	S
Template Known Secondary structure														T	T	T											B	S	S	G	G	G					T	S	.	.	.	.	.	.	.	.										T		T	T		S		B														S	G	G	G	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.									.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	T	L	Q	D	I	V	V	D	G	G	S	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	T	G	A	I	L	A	V	D	G	G	Y	T	V
Template Known Secondary structure		T			S						S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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