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Job DescriptionP15047
Confidence99.41%DateThu Jan 5 11:34:27 GMT 2012
Rank213Aligned Residues211
% Identity17%Templatec2uv8C_
PDB info PDB header:transferaseChain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.. .......20.........30 .........40. ........50.........60....
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Query Sequence  MDFSGKNVWVTG. AGKGIGYATALAFVEAGA. KVTGFDQAFTQ. . . . . . . . . . . . . . EQYPFATEVMDVADAAQVAQVCQ
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Template Sequence  VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE
Template Known Secondary structure  B

TT
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SSSTT
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   671........680.........690.........700.........710.........720.........730.........740.........750
 
   65....70.. .......80.........90.........100.........110.........120.........130...
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Query Sequence  RLLAETER. . . . . . . . . . . LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDA
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Template Sequence  FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH
Template Known Secondary structure  S
TTTTS




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SB
GGG

TTTT

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   751........760.........770.........780.........790.........800.........810.........820.........830
 
   134.....140.........150.........160.........170.........180.........190.........200.........210...
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Query Sequence  AHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIA
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Template Sequence  GTFG. . GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGT. . . . . . . . NNIIAEGIEKMG. . . . . . . . . VRTF
Template Known Secondary structure  T
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BTTGGGSS
TTT



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   831... .....840.........850.........860.........870..... ....880....... ..890.
 
   214.....220.........230
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Query Sequence  RPQEIANTILFLASDLA
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Template Sequence  SQKEMAFNLLGLLTPEV
Template Known Secondary structure  GGGS
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   897..900.........910...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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