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Job DescriptionP15047
Confidence100.00%DateThu Jan 5 11:34:27 GMT 2012
Rank148Aligned Residues228
% Identity26%Templatec2jahB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:clavulanic acid dehydrogenase; PDBTitle: biochemical and structural analysis of the clavulanic acid2 dehydeogenase (cad) from streptomyces clavuligerus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.. .......50.........60.........70.
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Query Sequence  DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE. . . . . . . . . . QYPFATEVMDVADAAQVAQVCQRLLAETE
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Template Sequence  ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG
Template Known Secondary structure  TTTT
STTSTT
S
TT



TT
S
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   72.......80.........90.........100.........110.........120.........130.........140.........150.
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Query Sequence  RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAAL
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Template Sequence  GLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXYXTRAALPHLL. RSKGTVVQXSSIAGRVNVRNAAVYQATKFGV
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STT

T.T


GGGT


TT
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   84.....90.........100.........110.........120.........130. ........140.........150.........160..
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  KSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLAS
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Template Sequence  NAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT. . . . . . . . . HTATKEXYEQRISQIRKLQAQDIAEAVRYAVT. APH
Template Known Secondary structure  GGGT

SB
SSGGGG

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TSSS

B
.S
T
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   163......170.........180.........190....... ..200.........210.........220......... 230..
 
   232.......240
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Query Sequence  HITLQDIVV
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Template Sequence  HATVHEIFI
Template Known Secondary structure  T



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   233......240.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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