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Job DescriptionP15047
Confidence100.00%DateThu Jan 5 11:34:27 GMT 2012
Rank27Aligned Residues243
% Identity32%Templatec2dteB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glucose 1-dehydrogenase related protein; PDBTitle: structure of thermoplasma acidophilum aldohexose dehydrogenase (aldt)2 in complex with nadh
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAG
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Template Sequence  DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH. DPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAG
Template Known Secondary structure  GGTT
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   4.....10.........20.........30.........40 .........50.........60.........70.........80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLE
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Template Sequence  IESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALD
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B
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   162.......170.........180.........190.... .....200.........210.........220.........230.........240
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Query Sequence  LAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQ. RIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVV
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Template Sequence  YAPL. LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYV
Template Known Secondary structure  TTT.S
SBSS
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SGGGTT

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   163... ...170.........180.........190.........200.........210.........220.........230.........240.
 
   241.....
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Query Sequence  DGGSTL
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Template Sequence  DGGLSI
Template Known Secondary structure  STTGGG
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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