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Job DescriptionP15047
Confidence100.00%DateThu Jan 5 11:34:27 GMT 2012
Rank122Aligned Residues223
% Identity30%Templatec1zbqB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:17-beta-hydroxysteroid dehydrogenase 4; PDBTitle: crystal structure of human 17-beta-hydroxysteroid dehydrogenase type 42 in complex with nad
Resolution2.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.... .....50.........60....
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Query Sequence  MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY. . . . . . . . . . . . . . . . PFATEVMDVADAAQVAQVCQ
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Template Sequence  LRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEGEKVVK
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TT
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GGG
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   65....70.........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  RLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAY
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Template Sequence  TALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANY
Template Known Secondary structure  S











GGG

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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   145....150.........160.........170.........180.........190.........200.........210.........220....
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Query Sequence  GASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILF
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Template Sequence  SAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAG. SRMTQTVMPEDL. . . . . . . . . . . . . . . . . . . VEALKPEYVAPLVLW
Template Known Secondary structure  GGGT


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   165....170.........180.........190....... ..200......... 210.........220....
 
   225....230.........240....
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Query Sequence  LASDLASHITLQDIVVDGGS
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Template Sequence  LCHESCE. ENGGLFEVGAGW
Template Known Secondary structure  TSTT

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   225....230. ........240...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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