Return to main results Retrieve Phyre Job Id

Job DescriptionP71296
Confidence5.53%DateThu Jan 5 12:12:41 GMT 2012
Rank49Aligned Residues8
% Identity38%Templatec3pamB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:transmembrane protein; PDBTitle: crystal structure of a domain of transmembrane protein of abc-type2 oligopeptide transport system from bartonella henselae str. houston-1
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  WIDIYHVN
Query Conservation 




 

Alig confidence 







Template Conservation   



   
Template Sequence  YIPLYHLS
Template Known Secondary structure 


Template Predicted Secondary structure 

Template SS confidence 







   567..570....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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