 |
| Job Description | P71296 | | Confidence | 7.32% | Date | Thu Jan 5 12:12:41 GMT 2012 |
| Rank | 29 | Aligned Residues | 22 |
| % Identity | 27% | Template | c3jqoV_ |
| PDB info |
PDB header:transport protein | Chain: V: PDB Molecule:traf protein; |
PDBTitle: crystal structure of the outer membrane complex of a type iv2 secretion system
|
| Resolution | 2.60 Å |
|
| | |
235 | . | . | . | . | 240 | . | . | . | |
|
. | . | . | . | . | . | 250 | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | |  | . | . | | | | | |
|
|
| | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
M | P | Y | P | V | V | C | W | I | . |
. |
D | I | Y | H | V | N | E | M | V | V | M | L | P |
| Query Conservation | |
|
| | | | |
|
|
| . | . |
|
|
| |
|
|
| | |
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
| |
| |
|
| |
|
|
|
| | |
| | |
|
|
|
|
| Template Sequence | |
V | P | G | Q | V | S | C | R | V | S | Q | D | V | Y | S | A | D | G | L | V | R | L | I | D |
| Template Known Secondary structure | |
S |
| | | | | | | |
| S |
| | |
| T | T | S |
| S | | | |
|
| Template Predicted Secondary structure | |
|
| | | | | | | | |
|
| | |
|
|
|
|
| | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
