Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABH9
Confidence99.89%DateThu Jan 5 11:15:32 GMT 2012
Rank29Aligned Residues220
% Identity20%Templated1ixza_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.. .......210.........220.........230.........240.........250.
Predicted Secondary structure 






............




















Query SS confidence 


















. . . . . . . . . . . .
















































Query Sequence  GIDPLIGREKELERAIQVL. . . . . . . . . . . . CRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG
Query Conservation   
    

  

      
............ 
  
 
 



 





 

  

  
    

  
    
  

  
Alig confidence 


















............




























..........









Template Conservation     

 
 
  
  
   
            
      


 







 

 


   ..........          
Template Sequence  TFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEA. . . . . . . . . . RVPFITASGS
Template Known Secondary structure 
GGG

S

TT



S

TTSST..........T

Template Predicted Secondary structure 



















..........







Template SS confidence 















































































   154.....160.........170.........180.........190.........200.........210... ......220...
 
   252.......260.........270.........280.........290.........300.........310.........320.........330.
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  SLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIF
Query Conservation   
 
     

 
  
  
          






  
   
            
   
 

 
 

 


  
     
Alig confidence 



..









































































Template Conservation      ..                
      

  

 
 
                           

            
Template Sequence  DFVE. . MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRNDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPDILDPA
Template Known Secondary structure  ..S
TTTTSSST

T

TT

S
GGGS
GG
Template Predicted Secondary structure 


..

























Template SS confidence 















































































   224... ..230.........240.........250.........260.........270.........280.........290.........300.
 
   332.......340.........350.........360.........370.........380.........390.........400.........410.
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  EKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL
Query Conservation    



 


  
 
  

  
   

  
         
 
   

      
 

     

  
  


        
Alig confidence 




..

































.....














.........









Template Conservation       ..
    
    
    
  
    
          .....   

  
 
 
  
.........
  
   
  
Template Sequence  LLRPG. . RFDRQIAIDAPDVKGREQILRIHARGKPLAEDVD. . . . . LALLAKRTPGFVGAD. . . . . . . . . LENLLNEAAL
Template Known Secondary structure  GGSTT..SS


S

TTS
B
TT

.....T
TT

.........
Template Predicted Secondary structure 


..
















.....




.........
Template SS confidence 















































































   311.... ....320.........330.........340......... 350.........360.... .....370....
 
   412.......420.........430.
Predicted Secondary structure 






Query SS confidence 



















Query Sequence  MPVSKRKKTVNVADIESVVA
Query Conservation           
   

     
Alig confidence 



















Template Conservation   
       
   
   
 
Template Sequence  LAAREGRRKITMKDLEEAAS
Template Known Secondary structure  TT
SSB
T
Template Predicted Secondary structure 







Template SS confidence 



















   375....380.........390....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions