Job Description P0ABH9 Confidence 96.25% Date Thu Jan 5 11:15:32 GMT 2012 Rank 360 Aligned Residues 161 % Identity 14% Template c3lvrE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium Resolution 3.38 Å

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		E	L	E	R	A	I	Q	V	L	C	R	R	R	K	N	N	P	L	L	V	G	E	S	G	V	G	K	T	A	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V	M	A	D	C	T	I	Y	S	L	D	.	I	G	S	L	L	A	G	T	K	Y	R	G	D	F	E	K	R	F	K	A	L	L	K
Query Conservation																																																										.
Alig confidence																																																										.
Template Conservation
Template Sequence		E	C	E	E	L	L	E	Q	A	Q	A	N	K	E	M	R	I	L	M	L	G	L	D	A	A	G	K	T	T	I	L	Y	K	L	K	L	G	Q	S	V	T	T	I	P	T	V	G	F	N	V	E	T	V	T	Y	K	N	V	K	F	N	V	W	D	V	G	G	Q	D	K	I	R	P	L	W	R	H	Y	Y	T
Template Known Secondary structure		T								T													S	T	T	S	S											S	S								S	S									S	S												G	G	G	S	T	T	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		669	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.						.	.	.	.	320								.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																													.	.	.	.	.						.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.						.	.	.	.	.	.	.
Query Sequence		Q	L	E	Q	D	T	N	S	I	L	F	I	D	E	I	H	T	I	I	G	A	G	A	A	S	G	G	Q	V	D	A	A	N	L	I	K	P	L	L	S	S	G	K	.	.	.	.	.	I	R	V	I	G	.	.	.	.	.	.	.	S	T	T	Y	Q	E	F	S	N	I	F	E	K	D	R	A	L	A	R	R
Query Conservation																																													.	.	.	.	.						.	.	.	.	.	.	.
Alig confidence					.	.	.									.	.	.	.	.	.	.	.																						.	.	.	.	.						.	.	.	.	.	.	.
Template Conservation					.	.	.									.	.	.	.	.	.	.	.
Template Sequence		G	T	Q	.	.	.	G	L	I	F	V	V	D	C	.	.	.	.	.	.	.	.	A	D	R	D	R	I	D	E	A	R	Q	E	L	H	R	I	I	N	D	R	E	M	R	D	A	I	I	L	I	F	A	N	K	Q	D	L	P	D	A	M	K	P	H	E	I	Q	E	K	L	G	L	T	R	I	R	D	R	N
Template Known Secondary structure		T			.	.	.								S	.	.	.	.	.	.	.	.	S			T	T													T	S	T	T		T	T										T	T	S	S	S											T	T		T	T			S	S
Template Predicted Secondary structure					.	.	.									.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.				.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	K	I	D	I	T	E	P	S	I	E	E	T	V	Q	I	I	N	G	L	K	P	K	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	Y	V	Q	P	S	C	A	T	S	G	D	G	L	Y	E	G	L	T	W	L	T	S	N	Y
Template Known Secondary structure								B	T	T	T	T	B	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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