Job Description P0ABH9 Confidence 96.56% Date Thu Jan 5 11:15:32 GMT 2012 Rank 331 Aligned Residues 148 % Identity 18% Template c3ld9D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase from ehrlichia chaffeensis at2 2.15a resolution Resolution 2.15 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.																					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	L	V	G	E	S	G	V	G	K	T	A	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V	M	A	D	C	T	I	Y	S	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	S	L	L	A	G	T	K	Y	R	G	D	F	E	K	R	F	K	A
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		I	T	F	E	G	I	D	G	S	G	K	T	T	Q	S	H	L	L	A	E	Y	L	S	E	I	Y	G	.	.	.	.	.	V	N	N	V	V	L	T	R	E	P	G	G	T	L	L	N	E	S	V	R	N	L	L	F	K	A	Q	G	L	D	S	L	S	E	L	L	F	F	I	A	M	R	R	E	H	F	V	K
Template Known Secondary structure							S	T	T	S	S																		.	.	.	.	.	G	G	G						S	S		S	S													S
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.						.	.	.	.	.	340	.
Predicted Secondary structure																					.																								.	.																								.	.	.	.	.
Query SS confidence																					.																								.	.																								.	.	.	.	.
Query Sequence		L	L	K	Q	L	E	Q	D	T	N	S	I	L	F	I	D	E	I	H	.	T	I	I	G	A	G	A	A	S	G	G	Q	V	D	A	A	N	L	I	K	P	L	L	.	.	S	S	G	K	I	R	V	I	G	S	T	T	Y	Q	E	F	S	N	I	F	E	K	D	.	.	.	.	.	R	A	L	A	R	R	F
Query Conservation																					.																								.	.																								.	.	.	.	.
Alig confidence																					.																								.	.																								.	.	.	.	.
Template Conservation
Template Sequence		I	I	K	P	S	L	M	Q	K	K	I	V	I	C	D	R	F	I	D	S	T	I	A	Y	Q	G	Y	G	Q	G	I	D	C	S	L	I	D	Q	L	N	D	L	V	I	D	V	Y	P	D	I	T	F	I	I	D	V	D	D	M	E	F	Y	Y	R	V	R	D	G	F	Y	D	I	A	K	K	N	P	H	R	C
Template Known Secondary structure		T							T	T							S										T	T	T	T																S				S																												T	T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		342	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		Q	K	I	D	I	T	E	P	S	.	.	I	E	E	T	V	Q	I	I	N	G	L	K
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		H	V	I	T	T	Y	D	I	D	D	I	N	F	V	H	L	E	V	I	K	V	L	Q
Template Known Secondary structure								S	S															T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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