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Job DescriptionP0ABH9
Confidence99.71%DateThu Jan 5 11:15:32 GMT 2012
Rank70Aligned Residues255
% Identity18%Templatec3k1jA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:atp-dependent protease lon; PDBTitle: crystal structure of lon protease from thermococcus onnurineus na1
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   435....440.........450.........460.........470.........480.........490.........500.........510....
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Query Sequence  RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI
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Template Sequence  GESLELGIEFTTTEEIEVPEKLIDQVIGQEHAVEVIKTAA. . . . . . . . . . . NQKRHVLLIGEPGTGKSMLGQAMAELLPT
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SS

SBGGGS


SS

S
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TTSSTS

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   18.20.........30.........40.........50....... ..60.........70.........80......
 
   515....520........ .530.........540.........550
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Query Sequence  ELLRFDMSEYMERH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TVSRLIGAPPGYVGFDQGGLLT. . . . . .
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Template Sequence  ETLEDILVFPNPEDENMPRIKTVPACQGRRIVEKYREKAKSQESVLVPKLLVDNCGRTKAPFIDATGAHAGALLGDVRHD
Template Known Secondary structure  SS


TT
TTS
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TT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   551........560.........570.........580.........590....... ..600.......
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Query Sequence  . . . . . . . . . . . . . DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR. . . . . . . . . . NVVLVMTTNA
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Template Sequence  PFLGTPAHERVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFVLVAAGN.
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GGGG

TTTSTTGGGS
S

B
S
TTSGGGG
B
S




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   215....220.........230.........240.........250.........260.........270.........280.........290...
 
   608.610.........620.........630.........640...... ...650.........660.........670.........680.....
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Query Sequence  GVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDN. . IIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . LDTVDKMHPALRSRIRGYGYEVYMRTTMPDTIENRRKLVQFVAQEVKRDGKIPHFTKE
Template Known Secondary structure  ......................S
S

S


SS

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   298.300.........310.........320.........330.........340.........350.....
 
   686...690.........700... ......710.........720....
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Query Sequence  ARNWLAEKGYDRAMGARP. . . . MARVIQDNLKKPLANELLFGS
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Template Sequence  AVEEIVRE. AQKRAGRKGHLTLRLRDLGGIVRAAGDIAVKKGK
Template Known Secondary structure  .TT
STT

TT
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   356...360... ......370.........380.........390.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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