Job Description P0ABH9 Confidence 99.58% Date Thu Jan 5 11:15:32 GMT 2012 Rank 91 Aligned Residues 205 % Identity 11% Template c3bosA_ PDB info PDB header:hydrolase regulator,dna binding protein Chain: A: PDB Molecule:putative dna replication factor; PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution Resolution 1.75 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	R	E	K	E	L	E	R	A	I	Q	V	L	C	R	R	R	K	N	N	P	L	L	V	G	E	S	G	V	G	K	T	A	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V	M	A	D	C	T	I	Y	S	L	D	I	G	S	L	L	A	G	T	K	Y	R	G	D	F	E	K	R	F
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.																													.
Template Conservation																																														.	.	.	.	.	.	.																													.
Template Sequence		Y	P	G	N	D	E	L	I	G	A	L	K	S	A	A	S	G	D	G	V	Q	A	I	Y	L	W	G	P	V	K	S	G	R	T	H	L	I	H	A	A	C	A	R	A	.	.	.	.	.	.	.	N	E	L	E	R	R	S	F	Y	I	P	L	G	I	H	A	S	I	S	T	A	L	L	E	G	L	E	Q	.
Template Known Secondary structure																		T		S		S							S	T	T	S	S													.	.	.	.	.	.	.			T	T								G	G	G	G	G	G	S		G	G	G	G	T	T	G	G	G	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.																													.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.								.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		K	A	L	L	K	Q	L	E	Q	D	T	N	S	I	L	F	I	D	E	I	H	T	I	I	G	A	G	A	A	S	G	G	Q	V	D	A	A	N	L	I	K	P	L	L	S	S	G	K	I	R	V	I	G	S	T	T	Y	Q	E	F	S	N	I	F	E	K	D	R	A	L	A	R	R	F	Q	.	.	.	K	I
Query Conservation																																																																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																						.	.	.																										.															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																						.	.	.																										.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	F	D	L	I	C	I	D	D	V	D	A	V	A	G	H	P	L	W	E	E	A	.	.	.	I	F	D	L	Y	N	R	V	A	E	Q	K	R	G	S	L	I	V	S	A	S	A	S	P	X	.	E	A	G	F	V	L	P	D	L	V	S	R	X	H	W	G	L	T	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	S	S						T	G	G	G	G	T	T								.	.	.													S								S	S		T	T	.	T	T	T													S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																						.	.	.																										.
Template SS confidence
													104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	T	E	P	S	I	E	E	T	V	Q	I	I	N	G	L	K	P	K	Y	E	A	H	H	D	V	R	Y	T	A	K	A	V	R	A	A	V	E	L	A	V	K	Y	I	N	D	R	H	L	P	D	K	A	I	D	V	I	D	E	A	G	A	R	A	R	L	M	P	V	S	K	R	K	K	T	V	N	V	A
Query Conservation
Alig confidence																						.	.	.	.																						.	.	.	.	.	.																			.	.	.	.	.
Template Conservation																						.	.	.	.																						.	.	.	.	.	.																			.	.	.	.	.
Template Sequence		Q	L	Q	P	X	X	D	D	E	K	L	A	A	L	Q	R	R	A	A	X	.	.	.	.	R	G	L	Q	L	P	E	D	V	G	R	F	L	L	N	R	X	A	R	D	L	.	.	.	.	.	.	R	T	L	F	D	V	L	D	R	L	D	K	A	S	X	V	H	Q	.	.	.	.	.	R	K	L	T	I	P
Template Known Secondary structure								G	G	G												.	.	.	.	T	T															T	T	T			.	.	.	.	.	.																		T	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.																						.	.	.	.	.	.																			.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.
		425	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	E	S	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	K	E	X	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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