Job Description P0ABH9 Confidence 98.16% Date Thu Jan 5 11:15:32 GMT 2012 Rank 118 Aligned Residues 164 % Identity 15% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.						480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.				.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.																																		.	.	.
Query SS confidence																																				.	.	.	.	.																																		.	.	.
Query Sequence		R	D	T	L	K	N	L	G	D	R	L	K	M	L	V	F	G	Q	D	K	A	I	E	A	L	T	E	A	I	K	M	A	R	A	.	.	.	.	.	G	L	G	H	E	H	K	P	V	G	S	F	L	F	A	G	P	T	G	V	G	K	T	E	V	T	V	Q	L	S	K	A	L	.	.	.	G	I	E	L	L
Query Conservation																																				.	.	.	.	.																																		.	.	.
Alig confidence																																				.	.	.	.	.																																		.	.	.
Template Conservation
Template Sequence		V	R	I	V	E	R	L	R	E	D	I	M	S	G	K	L	K	S	G	S	E	I	K	D	A	L	K	E	S	V	L	E	M	L	A	K	S	K	T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L
Template Known Secondary structure														T	T	S			S																						S					S	S	S										T	T	S																T	T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530						.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.						.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.			.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.																			.	.	.	.	.																				.	.
Query SS confidence															.	.	.	.	.																			.	.	.	.	.																				.	.
Query Sequence		R	F	D	M	S	E	Y	M	E	R	H	T	V	.	.	.	.	.	S	R	L	I	G	A	P	P	G	Y	V	G	F	D	Q	G	G	L	.	.	.	.	.	L	T	D	A	V	I	K	H	P	H	A	V	L	L	L	D	E	I	E	.	.	K	A	H	P	D	V	F	N	I	L	L	Q	V	M	D	N	G	T
Query Conservation															.	.	.	.	.																			.	.	.	.	.																				.	.
Alig confidence															.	.	.	.	.									.										.	.	.	.	.																				.	.																	.	.
Template Conservation																												.																																																				.	.
Template Sequence		M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	.	V	V	A	E	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	.	.
Template Known Secondary structure								S																T				.																						T	T		S										S	S																.	.
Template Predicted Secondary structure																												.																																																				.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	D	N	N	G	R	K	A	D	F	R	N	V	V	L	V	M	T	T	N	A	G	V	R	E	T	E	R
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	N	M	L	P	Q
Template Known Secondary structure		.	.			T	T	S	T	T			S								G	G	G	G	G	G	G
Template Predicted Secondary structure		.	.
Template SS confidence
				276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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