Job Description P0ABH9 Confidence 96.46% Date Thu Jan 5 11:15:32 GMT 2012 Rank 343 Aligned Residues 105 % Identity 19% Template c2z83A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:helicase/nucleoside triphosphatase; PDBTitle: crystal structure of catalytic domain of japanese2 encephalitis virus ns3 helicase/nucleoside triphosphatase3 at a resolution 1.8 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.																		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																			.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	K	N	N	P	L	L	V	G	E	S	G	V	G	K	T	.	A	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V	M	A	D	C	T	I	Y	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	G	S	L	L	A	G	T	K	Y	R	G	D	F	E	K	R
Query Conservation																			.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.													.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.
Template Sequence		R	K	R	Q	M	T	V	L	D	L	H	P	G	S	G	K	T	R	K	I	L	P	Q	I	I	K	D	A	I	Q	.	.	.	.	.	.	.	Q	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	V	R	Y	Q	T	G	N	E	I	V	D	V	M	C	H	A	T
Template Known Secondary structure		S	T	T									T	T	S		T	T	T	T												.	.	.	.	.	.	.	T	T									S											T	T	T	S										S
Template Predicted Secondary structure																																.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	A	L	L	K	Q	L	E	Q	D	T	N	S	I	L	F	I	D	E	I	H	T	I	I	G	A	G	A	A	S	G	G	Q	V	D	A	A	N	L	I	K	P	L	L	S	S	G	K	I	R	V	I	G	S	T
Query Conservation
Alig confidence																										.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		L	T	H	R	L	M	S	P	N	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	.	.	.	.	.	.	D	P	A	S	I	A	A	R	G	Y	I	A	T	K	V	E	L	G	E	A	A	A	I	F	M	T
Template Known Secondary structure								S							S					S	S	T	T			.	.	.	.	.	.	S																T	T	S
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions