Job Description P0ABH9 Confidence 99.66% Date Thu Jan 5 11:15:32 GMT 2012 Rank 82 Aligned Residues 216 % Identity 17% Template c2z4rB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: crystal structure of domain iii from the thermotoga2 maritima replication initiation protein dnaa Resolution 3.05 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	E	R	A	I	Q	V	L	C	R	R	R	K	N	N	P	L	L	.	V	G	E	S	G	V	G	K	T	A	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V	M	A	D	C	T	I	Y	S	L	D	I	G	S	L	L	A	G	T	K	Y	R	G	D	F	E	K	R	F	K	A	L	L	K	Q
Query Conservation																				.
Alig confidence																				.																									.	.	.	.	.															.	.
Template Conservation																																													.	.	.	.	.															.	.
Template Sequence		Y	H	A	A	L	E	V	A	K	H	P	G	R	Y	N	P	L	F	I	Y	G	G	V	G	L	G	K	T	H	L	L	Q	S	I	G	N	Y	V	V	Q	N	E	P	.	.	.	.	.	D	L	R	V	M	Y	I	T	S	E	K	F	L	N	.	.	D	L	V	D	S	M	K	E	G	K	L	N	E	F	R	E
Template Known Secondary structure											S	T	T	T	S								S	S	S	S	S																S	S	.	.	.	.	.	S	S													.	.								T	S
Template Predicted Secondary structure																																													.	.	.	.	.															.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		L	E	Q	D	T	N	S	I	L	F	I	D	E	I	H	T	I	I	G	A	G	A	A	S	G	G	Q	V	D	A	A	N	L	I	K	P	L	L	S	S	G	K	I	R	V	I	G	S	T	T	Y	Q	E	F	S	N	I	F	E	K	D	R	A	L	.	A	R	R	F	Q	K	I	D	I	T	E	P	S	I	E
Query Conservation																																																																		.
Alig confidence																												.	.	.																																				.
Template Conservation																												.	.	.
Template Sequence		K	Y	R	K	K	V	D	I	L	L	I	D	D	V	Q	F	L	I	G	K	T	G	V	Q	T	E	.	.	.	L	F	H	T	F	N	E	L	H	D	S	G	K	Q	I	V	I	C	S	D	R	E	P	Q	K	L	S	E	F	Q	D	R	L	V	S	R	F	Q	M	G	L	V	A	K	L	E	P	P	D	E	E
Template Known Secondary structure				T	T	T		S							G	G	G	G	T	T								.	.	.										T	T	T								S	S		T	T	T		S	S											S	S
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	V	Q	I	I	N	G	L	K	P	K	Y	E	A	H	H	D	V	R	Y	T	A	K	A	V	R	A	A	V	E	L	A	V	K	Y	I	N	D	R	H	L	P	D	K	A	I	D	V	I	D	E	A	G	A	R	A	R	L	M	P	V	S	K	R	K	K	T	V	N	V	A	D	I	E	S	V	V	A	R
Query Conservation
Alig confidence														.	.	.	.																				.	.	.	.	.	.																							.	.	.	.	.
Template Conservation														.	.	.	.																				.	.	.	.	.	.																							.	.	.	.	.
Template Sequence		T	R	K	S	I	A	R	K	M	L	E	I	.	.	.	.	E	H	G	E	L	P	E	E	V	L	N	F	V	A	E	N	V	D	D	.	.	.	.	.	.	N	L	R	R	L	R	G	A	I	I	K	L	L	V	Y	K	E	T	T	G	K	E	.	.	.	.	.	V	D	L	K	E	A	I	L	L	L	K	D
Template Known Secondary structure														.	.	.	.		T					T	T											S	.	.	.	.	.	.																			S	S	S		.	.	.	.	.										T	G	G
Template Predicted Secondary structure														.	.	.	.																				.	.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.							.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.						320	.	.	.	.	.	.	.	.	.	330	.
		433	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	K
Template Known Secondary structure		G	T
Template Predicted Secondary structure
Template SS confidence
		332	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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