 |
Job Description | P0ABH9 | Confidence | 95.90% | Date | Thu Jan 5 11:15:32 GMT 2012 |
Rank | 383 | Aligned Residues | 99 |
% Identity | 16% | Template | c2w74B_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:type i restriction enzyme ecor124ii r protein; |
PDBTitle: mutant (k220r) of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp
|
Resolution | 2.74 Å |
|
 |
  |   |
463 | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | D | K | A | I | E | A | L | T | E | A | I | K | M | A | R | A | G | L | G | H | E | H | K | P | V | G | S | F | L | F | A | G | P | T | G | V | G | K | T | E | V | T | V | Q | L | S | K | A | L | G | I | E | . |
. |
. |
. |
. |
. |
L | L | R | F | D | M | S | E | Y | M | E | R | H | T | V | S | R | L | I | G | A |
Query Conservation |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . |
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |
Template Sequence |   |
Q | I | A | A | T | E | R | I | L | W | K | I | K | S | S | F | T | A | K | N | W | S | K | P | E | S | G | G | . |
Y | I | W | H | T | T | G | S | G | K | T | L | T | S | F | K | A | A | R | L | A | T | E | L | D | F | I | D | K | V | F | F | V | V | D | R | K | D | L | D | Y | Q | T | M | K | E | Y | Q | R | F | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S | G | G | G | S |  | . |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|
|  |  |  |  |  |  |
| G | G | G |
|
|  |  |  |  |  |  |  |  | T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
276 | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | |
. | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . |
  |
  |   |
537 | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | P | G | Y | V | G | F | D | Q | G | G | L | L | T | D | A | V | I | K | H | P | H | A | V | L | L |
Query Conservation |   |
  |   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
Template Sequence |   |
P | D | S | V | N | G | S | E | N | T | A | G | L | K | R | N | L | D | K | D | D | N | K | I | I | V |
Template Known Secondary structure |   |
T | T |
|
| S | S | S |
|
|
|  |  |  |  |  |  | T | T |
| T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
355 | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|