Job Description P0ABH9 Confidence 96.33% Date Thu Jan 5 11:15:32 GMT 2012 Rank 354 Aligned Residues 107 % Identity 18% Template c2vyeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:replicative dna helicase; PDBTitle: crystal structure of the dnac-ssdna complex Resolution 4.10 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	L	V	G	E	S	G	V	G	K	T	A	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V	M	A	D	C	T	I	Y	S	L	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		I	I	V	A	A	R	P	S	V	G	K	T	A	F	A	L	N	I	A	Q	N	V	A	T	K	T	.	.	.	.	.	.	N	E	N	V	A	I	F	S	L	E	M	S	A	Q	Q	L	V	M	R	M	L	C	A	E	G	N	I	N	A	Q	N	L	R	T	G	K	L	T	P	E	D	W	G	K	L	T	M	A
Template Known Secondary structure								S	T	T																T	S	.	.	.	.	.	.		S							S	S	S															T								T	T
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.							.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
								251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300					.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure		.	.	.	.	.	.																																																			.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																			.	.	.	.
Query Sequence		.	.	.	.	.	.	G	S	L	L	A	G	T	K	Y	R	G	D	F	E	K	R	F	K	A	L	L	K	Q	L	E	Q	D	T	N	S	I	L	F	I	D	E	I	H	T	I	I	G	A	G	A	A	S	G	G	Q	.	.	.	.	V	D	A	A	N	L	I	K	P	L	L	S	S	G	K	I	R	V	I	G
Query Conservation		.	.	.	.	.	.																																																			.	.	.	.
Alig confidence		.	.	.	.	.	.																																																			.	.	.	.
Template Conservation
Template Sequence		M	G	S	L	S	N	A	G	I	Y	I	D	D	T	P	S	I	R	V	S	D	I	R	A	K	C	R	R	L	K	Q	E	S	G	L	G	M	V	V	I	D	Y	L	Q	L	I	Q	G	S	G	R	N	R	E	N	R	Q	Q	E	V	S	E	I	S	R	S	L	K	A	L	A	R	E	L	E	V	P	V	I	A
Template Known Secondary structure							T	S								S	S		B															T										G	G	G	S	B			S			S	S																				T	T	S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		321	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		360	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions