Job Description P0ABH9 Confidence 96.61% Date Thu Jan 5 11:15:32 GMT 2012 Rank 327 Aligned Residues 103 % Identity 23% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	K	N	N	P	L	L	V	G	E	S	G	V	G	K	T	A	.	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V	M	A	D	C	T	I	Y	S	L	D	I	G	S	L	L	A	G	T	K	Y	R	G	D	F	E	K	R	F	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.												.	.	.	.	.	.	.																	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		R	K	K	R	L	T	I	M	D	L	H	P	G	A	G	K	T	K	R	I	L	P	S	I	V	R	E	A	L	K	.	.	.	.	.	.	.	R	R	L	R	T	L	I	L	A	P	T	R	V	V	A	A	.	.	.	.	.	E	M	E	E	A	L	R	G	L	P	I	R	Y	Q	T	P	A	V	K	S	D	H
Template Known Secondary structure		S	T	T									T	T	T			T	T	T												.	.	.	.	.	.	.	T	T								S	S						.	.	.	.	.						T	T	T	S							T	T		S
Template Predicted Secondary structure																																.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.								.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
															270	.	.	.	.	.	.	.	.	.					280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.																																										.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.																																										.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	K	Q	L	E	Q	D	T	N	.	.	.	.	S	I	L	F	I	D	E	I	H	T	I	I	G	A	G	A	A	S	G	G	Q	V	D	A	A	N	L	I	K	P	L	L	S	S	G	K	I	R	V	I	G	.	S	T	T	Y	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.																																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.												.	.	.	.	.	.																									.
Template Conservation																																								.	.	.	.	.	.
Template Sequence		T	G	R	E	I	V	D	L	M	C	H	A	T	F	T	T	R	L	L	S	S	T	R	V	P	N	Y	N	L	I	V	M	D	E	A	H	F	T	.	.	.	.	.	.	D	P	C	S	V	A	A	R	G	Y	I	S	T	R	V	E	M	G	E	A	A	A	I	F	M	T	A	T	P	P
Template Known Secondary structure				S	S																		S						S						S	T	T			.	.	.	.	.	.	S																	T	S								S	S		T
Template Predicted Secondary structure																																								.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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