Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABH9
Confidence96.34%DateThu Jan 5 11:15:32 GMT 2012
Rank352Aligned Residues93
% Identity17%Templatec2v6jA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:rna helicase; PDBTitle: kokobera virus helicase: mutant met47thr
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   490.........500....... ..510.........520.........530.........540...... ...550.......
Predicted Secondary structure 





....



















.....

...
Query SS confidence 

















. . . .






































. . . . .










. . .
Query Sequence  SFLFAGPTGVGKTEVTVQ. . . . LSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG. . . . . GLLTDAVIKHP. . .
Query Conservation    

 

 
 


 

  ....

  
      
  
          
 
   



    .....  
   
   
...
Alig confidence 

















....






































.....










...
Template Conservation     
   





                
 
   
   
  
    
            
 
 
   
   
       
Template Sequence  LTVLDLHPGAGKTRRVLPQLVREAVKKRLRTVILAPTRVVASETYEALRGEPIRYMGNEIVDFMCHSTFTMKLLQGVRVP
Template Known Secondary structure 


TTS
TTTTTT

SSTTTS




ST



Template Predicted Secondary structure 






















Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   558.560.........570.........580..
Predicted Secondary structure  .









Query SS confidence  .
























Query Sequence  . HAVLLLDEIEKAHPDVFNILLQVMD
Query Conservation  .  

 






   
   

  
 
Alig confidence  .
























Template Conservation      




 
               
Template Sequence  NYNLYIMDEAHFLDPASVAARGYIET
Template Known Secondary structure 

STTT

S
Template Predicted Secondary structure 





Template SS confidence 

























   93......100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions