Job Description P0ABH9 Confidence 95.69% Date Thu Jan 5 11:15:32 GMT 2012 Rank 402 Aligned Residues 92 % Identity 17% Template c2jlrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:serine protease subunit ns3; PDBTitle: dengue virus 4 ns3 helicase in complex with amppnp Resolution 2.0 Å

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		490	.	.	.	.	.	.	.	.	.	500	.	.	.			.	.	.	.	.	.	510	.	.			.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.															.	.	.	.	550	.
Predicted Secondary structure																.	.										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	F	L	F	A	G	P	T	G	V	G	K	T	E	.	.	V	T	V	Q	L	S	K	A	L	.	.	G	I	E	L	L	R	F	D	M	S	E	Y	M	E	R	H	T	V	S	R	L	I	G	A	P	P	G	Y	V	G	F	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	L	L	T	D
Query Conservation																.	.										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	I	M	D	L	H	P	G	A	G	K	T	K	R	I	L	P	S	I	V	R	E	A	L	K	R	R	L	R	T	L	I	L	A	P	T	R	V	V	A	A	E	M	E	E	A	L	R	G	L	P	I	R	Y	Q	T	P	A	V	K	S	D	H	T	G	R	E	I	V	D	L	M	C	H	A	T	F	T	T
Template Known Secondary structure									T	T	S	S	T	T	T	T												T	T								S	S											T	T	T	S							T	T	S	S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		552	.	.	.	.	.					.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		A	V	I	K	H	P	.	.	.	.	H	A	V	L	L	L	D	E	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	M
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.
Template Conservation
Template Sequence		R	L	L	S	S	T	R	V	P	N	Y	N	L	I	V	M	D	E	A	H	F	T	D	P	C	S	V	A	A	R	G	Y	I	S
Template Known Secondary structure							S						S						S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions