Job Description P0ABH9 Confidence 97.28% Date Thu Jan 5 11:15:32 GMT 2012 Rank 243 Aligned Residues 140 % Identity 16% Template c2iusB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:dna translocase ftsk; PDBTitle: e. coli ftsk motor domain Resolution 2.7 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.													.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	N	P	L	L	V	G	E	S	G	V	G	K	T	A	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V	M	A	D	C	T	I	Y	S	L	D	I	G	S	.	.	.	.	.	.	.	.	.	.	.	.	L	L	A	G	T	K	Y	R	G	D	F	E	K	R	F	K	A	L	L	K	Q	L	E
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.
Template Sequence		P	H	L	L	V	A	G	T	T	G	S	G	A	S	V	G	V	N	A	M	I	L	S	M	L	Y	K	A	Q	P	.	.	.	E	D	V	R	F	I	M	I	D	P	K	M	L	E	L	S	V	Y	E	G	I	P	H	L	L	T	E	V	V	T	D	M	K	D	A	A	N	A	L	R	W	C	V	N	E	M	E
Template Known Secondary structure			S							T	T	S	S														T	T			T	.	.	.	T	T								T	T	S	S	S	S	G	G	G	T	T		T	T	B	S	S	S		B		S
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.				.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.
		276																																										.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	N	S	I	L	F	I	D	E	I	H	T	I	I	G	A	G	A	A	S	G	G	Q	V	D	A	A	N	L	I	K	P	L	L	S	S	G
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		R	R	Y	K	L	M	S	A	L	G	V	R	N	L	A	G	Y	N	E	K	I	A	E	A	D	R	M	M	R	P	I	P	D	P	Y	W	H	P	V	L	K	K	E	P	Y	I	V	V	L	V	D	E	F	A	D	L	M	M	T	.	.	.	.	.	V	G	K	K	V	E	E	L	I	A	R	L	A	Q	K	A
Template Known Secondary structure										T	T		S	S														T	T				B		T	T				B																					.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		1062	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120						.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.
		315				.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.																													.
Query SS confidence			.	.	.																													.
Query Sequence		K	.	.	.	I	R	V	I	G	S	T	T	Y	Q	E	F	S	N	I	F	E	K	D	R	A	L	A	R	R	F	Q	K	.	I	D	I	T	E	P	S	I	E	E	T	V	Q	I	I
Query Conservation			.	.	.																													.
Alig confidence			.	.	.											.	.	.																.
Template Conservation																.	.	.
Template Sequence		R	A	A	G	I	H	L	V	L	A	T	Q	R	P	.	.	.	S	V	D	V	I	T	G	L	I	K	A	N	I	P	T	R	I	A	F	T	V	S	S	K	I	D	S	R	T	I	L
Template Known Secondary structure					T								S			.	.	.		T	T	T	S																	S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		1146	.	.	.	1150	.	.	.	.	.	.	.	.	.				1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions