Job Description P0ABH9 Confidence 99.69% Date Thu Jan 5 11:15:32 GMT 2012 Rank 75 Aligned Residues 187 % Identity 10% Template c2hcbC_ PDB info PDB header:replication Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus Resolution 3.51 Å

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		185	.	.		.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.					.															.	.	.
Query SS confidence					.					.															.	.	.
Query Sequence		I	D	P	.	L	I	G	R	.	E	K	E	L	E	R	A	I	Q	V	L	C	R	R	.	.	.	R	K	N	N	P	L	L	V	G	E	S	G	V	G	K	T	A	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V	M	A	D	C	T	I	Y	S	L	D	I	G	S	L	L	A	G	T	K	Y
Query Conservation					.					.															.	.	.
Alig confidence					.					.															.	.	.																													.	.	.	.	.	.	.																.	.
Template Conservation																																																								.	.	.	.	.	.	.																.	.
Template Sequence		L	E	N	F	I	V	G	E	G	N	R	L	A	Y	E	V	V	K	E	A	L	E	N	L	G	S	L	Y	N	P	I	F	I	Y	G	S	V	G	T	G	K	T	H	L	L	Q	A	A	G	N	E	A	K	K	.	.	.	.	.	.	.	R	G	Y	R	V	I	Y	S	S	A	D	D	F	A	Q	.	.	A	M
Template Known Secondary structure		S	S	S	S				T	T	T										T	T	T	T	T	T	T	S									S	S	S	S	S															.	.	.	.	.	.	.	T	T														.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.																.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	D	F	E	K	R	F	K	A	L	L	K	Q	L	E	Q	D	T	N	S	I	L	F	I	D	E	I	H	T	I	I	G	A	G	A	A	S	G	G	Q	V	D	A	A	N	L	I	K	P	L	L	S	S	G	K	I	R	V	I	G	S	T	T	Y	Q	E	F	S	N	I	F	E	K	D	R	A	L	A	R
Query Conservation
Alig confidence																						.																				.	.	.
Template Conservation																						.																				.	.	.
Template Sequence		V	E	H	L	K	K	G	T	I	N	E	F	R	N	M	Y	K	S	V	D	.	L	L	L	L	D	D	V	Q	F	L	S	G	K	E	R	T	Q	I	E	.	.	.	F	F	H	I	F	N	T	L	Y	L	L	E	K	Q	I	I	L	A	S	D	R	H	P	Q	K	L	D	G	V	S	D	R	L	V	S	R	F
Template Known Secondary structure								T											T		S	.							G	G	G	G	T	T		S						.	.	.											T	T								S	S		G	G	G		T	T	S
Template Predicted Secondary structure																						.																				.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	Q	K	I	D	I	T	E	P	S	I	E	E	T	V	Q	I	I	N	G	L	K	P	K	Y	E	A	H	H	D	V	R	Y	T	A	K	A	V	R	A	A	V	E	L	A	V	K	Y
Query Conservation
Alig confidence																											.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		E	G	G	I	L	V	E	I	E	L	D	N	K	T	R	F	K	I	I	K	E	K	L	K	E	.	.	.	.	F	N	L	E	L	R	K	E	V	I	D	Y	L	L	E	N	T	K	N	V
Template Known Secondary structure				S									S														.	.	.	.	T	T																	S
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions