Job Description P0ABH9 Confidence 97.97% Date Thu Jan 5 11:15:32 GMT 2012 Rank 130 Aligned Residues 147 % Identity 13% Template c2gnoA_ PDB info PDB header:replication Chain: A: PDB Molecule:dna polymerase iii, gamma subunit-related protein; PDBTitle: crystal structure of a dna polymerase iii, gamma subunit-related2 protein (tm0771) from thermotoga maritima msb8 at 2.00 a resolution Resolution 2.00 Å

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		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	E	R	A	I	Q	V	L	C	R	R	R	K	N	N	P	L	L	V	G	E	S	G	V	G	K	T	A	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V	M	A	D	C	T	I	Y	S	L	D	I	G	S	L	L	A	G	T	K	Y	R	G	D	F	E	K	R	F	K	A	L	L	K
Query Conservation
Alig confidence																																														.	.	.	.												.	.	.
Template Conservation																																														.	.	.	.												.	.	.
Template Sequence		D	Q	L	E	T	L	K	R	I	I	E	K	S	E	G	I	S	I	L	I	N	G	E	D	L	S	Y	P	R	E	V	S	L	E	L	P	E	Y	V	E	K	F	P	P	.	.	.	.	K	A	S	D	V	L	E	I	D	P	E	.	.	.	G	E	N	I	G	I	D	D	I	R	T	I	K	D	F	L	N	Y
Template Known Secondary structure													T		S	S								S	S	S	S															T	S			.	.	.	.		T	T	T							S	.	.	.	S	S		B													T	S
Template Predicted Secondary structure																																														.	.	.	.												.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		Q	L	E	Q	D	T	N	S	I	L	F	I	D	E	I	H	T	I	I	G	A	G	A	A	S	G	G	Q	V	D	A	A	N	L	I	K	P	L	L	S	.	.	S	G	K	I	R	V	I	G	S	T	T	Y	Q	E	F	S	N	I	F	E	K	D	R	A	L	A	R	R	F	Q	K	I	D	I	T	E	P	S
Query Conservation																																										.	.
Alig confidence																				.	.	.	.	.	.	.	.	.														.	.												.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Sequence		S	P	E	L	Y	T	R	K	Y	V	I	V	H	D	C	E	R	X	.	.	.	.	.	.	.	.	.	T	Q	Q	A	A	N	A	F	L	K	A	L	E	E	P	P	E	Y	A	V	I	V	L	N	T	R	.	.	.	.	.	R	W	H	Y	L	L	P	T	I	K	S	R	V	F	R	V	V	V	N	V	P	K
Template Known Secondary structure				S	S	S	S	S						T	T	G	G	G	B	.	.	.	.	.	.	.	.	.								T						S			T	T								S	.	.	.	.	.		G	G	G	S						T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																											.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.										.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	E	T	V	Q	I	I	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	R	D	L	V	K	E	K	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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