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Job DescriptionP0ABH9
Confidence99.69%DateThu Jan 5 11:15:32 GMT 2012
Rank76Aligned Residues188
% Identity18%Templatec2chvE_
PDB info PDB header:dna-binding proteinChain: E: PDB Molecule:replication factor c small subunit; PDBTitle: replication factor c adpnp complex
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210.........220.........230.........240.........250......
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Query Sequence  NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAG
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Template Sequence  VEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGENW. . . . . RDNFIEMNASDERGI
Template Known Secondary structure  T

SSGGG

S
GGGTTTT





TTSSTT

.....TTT
TTSTTST
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   8.10.........20.........30.........40.........50.........60....... ..70.........80..
 
   257..260.........270.........280.........290.........300.........310.. .......320.........330....
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Query Sequence  TKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS. . SGKIRVIGSTTYQEFSNIFEKD
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Template Sequence  DVVRHKIKEFA. . RTAPIGGAPFKIIFLDEADAL. . . . . . . . . TADAQAALRRTMEMYSKSCRFILSCN. . . . . YVSRII
Template Known Secondary structure  TTSS..S

TTT


TGGGS.........
TTGGGTSSSSSSS.....
GGGS
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   83......90... ......100.........110.... .....120.........130.........140 ......
 
   335....340.........350.........360.........370.........380.........
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Query Sequence  RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYI
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Template Sequence  EPIQSRCAVFRFKPVPKEAMKKRLLEICEK. . . . EGVKITEDGLEALIYISGGDF
Template Known Secondary structure  TT





T....TT

B
TT
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   147..150.........160.........170...... ...180.........190.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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