Job Description P0ABH9 Confidence 99.70% Date Thu Jan 5 11:15:32 GMT 2012 Rank 72 Aligned Residues 218 % Identity 18% Template c2c9oC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:ruvb-like 1; PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1 Resolution 2.2 Å

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		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.			.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.																.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.																.	.	.	.	.	.	.	.
Query Sequence		L	V	F	G	Q	D	K	A	I	E	A	L	T	E	A	I	K	M	A	R	A	G	L	G	H	E	H	K	P	V	G	S	F	L	F	A	G	P	T	G	V	G	K	T	E	V	T	V	Q	L	S	K	A	L	G	.	.	I	E	L	L	R	F	D	M	S	E	Y	M	E	R	H	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.																.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.																									.	.																.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		G	L	V	G	Q	E	N	A	R	E	A	C	G	V	I	V	E	L	I	K	S	K	K	M	A	G	R	.	.	.	.	A	V	L	L	A	G	P	P	G	T	G	K	T	A	L	A	L	A	I	A	Q	E	L	G	S	K	V	P	F	C	P	M	V	G	S	E	V	Y	S	T	E	I	K	K	T	E	V	L	M
Template Known Secondary structure		T			S																	T	T			T	T		.	.	.	.								T	T	S	S														T	T	S							G	G	G	G			S	S	S
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
																							529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	S	R	L	I	G	A	P	P	G	Y	V	G	F	D	Q	G	G	L	L	T	D	A	V	I	K	H	P	H	A	V	L	L	L	D	E	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	M	D	N	G	T	L	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		E	N	F	R	R	A	I	G	L	R	I	K	E	T	K	K	K	E	I	I	Q	D	V	T	L	H	D	L	D	V	A	G	E	I	N	K	V	V	N	K	Y	I	D	Q	G	I	A	E	L	V	P	G	V	L	F	V	D	E	V	H	M	L	D	I	E	C	F	T	Y	L	H	R	A	L	E	S	.	.	.	.
Template Known Secondary structure							T																							T	T														T	T	S													G	G	G		B												T	S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	N	G	R	K	A	D	F	R	N	V	V	L	V	M	T	T	N	A	G	V	R	E	T	E	R	K	S	I	G	L	I	H	Q	D	N	S	T	D	A	M	E	E	I	K	K	I	F	T	P	E	F	R	N	R	L	D	N	I	I	W	F	D	H	L	S	T	D	V	I	H	Q	V	V	D	K	F	I	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation		.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		.	.	.	.	.	.	.	S	I	A	P	I	V	I	F	A	S	N	R	G	N	C	V	I	R	G	T	E	D	I	T	S	P	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	L	D	L	L	D	R	V	.	M	I	I	R	T	M	L	Y	T	P	Q	E	M	K	Q	I	I	K	I	R	A	Q
Template Known Secondary structure		.	.	.	.	.	.	.	S	S											S					B	T	T	S	S					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T		.
Template Predicted Secondary structure		.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
									322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.														350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	Q	V	Q	L	D	Q	K	G	V	S	L	E	V	S	Q	E	A	R	N	W	L	A	E	K	G	Y	D	R	A	M	G	A	R	P	M	A	R	V	I	Q	D	N	L	K	K	P	L
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.																				.	.
Template Conservation			.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		T	.	.	.	.	.	.	.	.	.	E	G	I	N	I	S	E	E	A	L	N	H	L	G	E	I	G	T	K	.	.	T	T	L	R	Y	S	V	Q	L	L	T	P	A	N	L	L	A	K
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	T	T			B															.	.	S								T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		381										.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400			.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions