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Job DescriptionP0ABH9
Confidence99.59%DateThu Jan 5 11:15:32 GMT 2012
Rank90Aligned Residues190
% Identity18%Templatec1xxhB_
PDB info PDB header:transferaseChain: B: PDB Molecule:dna polymerase iii subunit gamma; PDBTitle: atpgs bound e. coli clamp loader complex
Resolution3.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LNQLARVGGIDPLIGREKELERAIQVLCRRRKNN. PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCT. . . . . . . . . .
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Template Sequence  LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQG
Template Known Secondary structure  T

SSGGG

S
TT


S

STTSSS
TT
S
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ST
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Query Sequence  . . . . IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS. . GKIRV
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Template Sequence  RFVDLIEIDAASRTK. . . . VEDTRDLLDNVQYAPARGRFKVYLIDEVHML. . . . . . . . . SRHSFNALLKTLEEPPEHVKF
Template Known Secondary structure 

TTSS
STT....TTT


S
SSSS

TGGG
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TT

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Query Sequence  IGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK
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Template Sequence  LLATT. . . . . DPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNE. . . . EHIAHEPRALQLLARAAEG
Template Known Secondary structure  S.....
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TS




T....TT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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