Job Description P0ABH9 Confidence 96.67% Date Thu Jan 5 11:15:32 GMT 2012 Rank 320 Aligned Residues 117 % Identity 20% Template c1xpuB_ PDB info
PDB header: transcription/rnaChain: B: PDB Molecule: rho transcription termination factor;
PDBTitle: structural mechanism of inhibition of the rho transcription2 termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-3 dihydrobicyclomycin (fpdb)
Resolution 3.05 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
210 . . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
P L L V G E S G V G K T A I A E G L A W R I V Q G D V P E V M A D C T I Y S L D I G .
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S L L A G T K Y R G D F E K R F K A L L K Q
Query Conservation
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Alig confidence
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Template Conservation
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Template Sequence
G L I V A P P K A G K T M L L Q N I A Q S I A Y N H .
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P D C V L M V L L I D E R P E E V T E M Q R L V K G E V V A S T F D E P A S R H V Q V A E M V I E
Template Known Secondary structure
S S S S . . . . . T T S S S T T S
Template Predicted Secondary structure
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Template SS confidence
174 . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . .
274 . . . . . 280 . . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
L E Q .
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D T N S I L F I D E I H T I I G A .
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G A A S G G Q V D A A N L I K P L L S S .
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G K I R V I G S T .
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T Y Q E F S N I F
Query Conservation
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Alig confidence
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Template Conservation
Template Sequence
K A K R L V E H K K D V I I L L D S I T R L A R A Y N T V V P A V L T G G V D A N A L H R P K R F F G A A R N V E E G G S L T I I A T A L I D T G S K M D E V I
Template Known Secondary structure
T T S S B S S S S B G G G G T T T S S S
Template Predicted Secondary structure
Template SS confidence
249 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280 . . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
