Job Description P0ABH9 Confidence 100.00% Date Thu Jan 5 11:15:32 GMT 2012 Rank 2 Aligned Residues 677 % Identity 44% Template c1qvrB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		L	N	Q	E	L	E	L	S	L	N	M	A	F	A	R	A	R	E	H	R	H	E	F	M	T	V	E	H	L	L	L	A	L	L	S	N	P	S	.	.	A	R	E	A	L	E	A	C	S	V	D	L	V	A	L	R	Q	E	L	E	A	F	I	E	Q	T	T	P	V	L	P	A	S	E	E	E	R	D	T	Q
Query Conservation																																								.	.
Alig confidence																																								.	.																													.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		W	T	Q	A	A	R	E	A	L	A	Q	A	Q	V	L	A	Q	R	M	K	H	Q	A	I	D	L	P	H	L	W	A	V	L	L	K	D	E	R	S	L	A	W	R	L	L	E	K	A	G	A	D	P	K	A	L	K	E	L	Q	E	R	E	L	A	R	L	P	K	.	.	.	V	E	G	A	E	V	G	Q	Y
Template Known Secondary structure																				T	T		S														S	T	T	S								T	T	T																T	S			.	.	.			G	G	G	T	T
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	L	S	F	Q	R	V	L	Q	R	A	V	F	H	V	Q	S	S	G	R	N	E	V	T	G	A	N	V	L	V	A	I	F	S	E	Q	E	S	Q	A	A	Y	L	L	R	K	H	E	V	S	R	L	D	V	V	N	F	I	S	H	G	T	R	K	D	E	P	T	Q	S	S	D	P	G	S	Q	P	N	S
Query Conservation
Alig confidence																																				.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	S	R	L	S	G	A	L	N	R	A	E	G	L	M	E	E	L	K	D	R	Y	V	A	V	D	T	L	V	L	A	L	A	.	.	E	A	T	P	G	L	P	G	L	E	A	L	K	G	A	L	K	E	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	R	T	V	Q	T
Template Known Secondary structure																			S	S	S		S	S												.	.			S	T	T	S												T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S			S
Template Predicted Secondary structure																																				.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																		.	.	.	140	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	Q	A	G	G	E	E	R	M	E	N	F	T	T	N	L	N	Q	L	A	R	V	G	G	I	D	P	L	I	G	R	E	K	E	L	E	R	A	I	Q	V	L	C	R	R	R	K	N	N	P	L	L	V	G	E	S	G	V	G	K	T	A	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	A	E	S	T	Y	N	A	L	E	Q	Y	G	I	D	L	T	R	L	A	A	E	G	K	L	D	P	V	I	G	R	D	E	E	I	R	R	V	I	Q	I	L	L	R	R	T	K	N	N	P	V	L	I	G	E	P	G	V	G	K	T	A	I	V	E	G	L	A	Q	R	I	V	K	G	D	V	P	E	G
Template Known Secondary structure		S	S		S				S																T		S					S												T	T		S	S	S									T	T	S																T		S		T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		M	A	D	C	T	I	Y	S	L	D	I	G	S	L	L	A	G	T	K	Y	R	G	D	F	E	K	R	F	K	A	L	L	K	Q	L	E	Q	D	T	.	N	S	I	L	F	I	D	E	I	H	T	I	I	G	A	G	A	A	S	G	G	Q	V	D	A	A	N	L	I	K	P	L	L	S	S	G	K	I	R	V
Query Conservation																																									.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	G	K	R	I	V	S	L	Q	.	.	.	.	.	.	.	.	.	.	.	M	E	F	E	E	R	L	K	A	V	I	Q	E	V	V	Q	S	Q	G	E	V	I	L	F	I	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	P	A	L	A	R	G	E	L	R	L
Template Known Secondary structure		S	T	T								.	.	.	.	.	.	.	.	.	.	.																T	T		S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.												.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																					.	.	.	.	.	.	.	.	.	270	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	S	T	T	Y	Q	E	F	S	N	I	F	E	K	D	R	A	L	A	R	R	F	Q	K	I	D	I	T	E	P	S	I	E	E	T	V	Q	I	I	N	G	L	K	P	K	Y	E	A	H	H	D	V	R	Y	T	A	K	A	V	R	A	A	V	E	L	A	V	K	Y	I	N	D	R	H	L	P	D	K	A
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		I	G	A	T	T	L	D	E	Y	R	E	.	I	E	K	D	P	A	L	E	R	R	F	Q	P	V	Y	V	D	E	P	T	V	E	E	T	I	S	I	L	R	G	L	K	E	K	Y	E	V	H	H	G	V	R	I	S	D	S	A	I	I	A	A	A	T	L	S	H	R	Y	I	T	E	R	R	L	P	D	K	A
Template Known Secondary structure												T	.	G	G	G						T	T																													T	T																					S	S
Template Predicted Secondary structure													.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	V	I	D	E	A	G	A	R	A	R	L	M	P	V	S	K	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	L	I	D	E	A	A	A	R	L	R	M	A	L	E	S	A	P	E	E	I	D	A	L	E	R	K	K	L	Q	L	E	I	E	R	E	A	L	K	K	E	K	D	P	D	S	Q	E	R	L	K	A	I	E	A	E	I	A	K	L	T	E	E	I	A	K	L	R	A	E	W	E	R	E	R	E	I	L	R
Template Known Secondary structure																	T	S																							T	S	S			T	T	T	T											G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
																																																											419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	V	N	V	A	D	I	E	S	V	V	A	R	I	A	R	I	P	E	K	S	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	R	E	A	Q	H	R	L	D	E	V	R	R	E	I	E	L	A	E	R	Q	Y	D	L	N	R	A	A	E	L	R	Y	G	E	L	P	K	L	E	A	E	V	E	A	L	S	E	K	L	R	G	A	R	F	V	R	L	E	V	T	E	E	D	I	A	E	I	V	S	R	W	T	G	I	P	V	S	K	L
Template Known Secondary structure																								T										T	T															T	T	S	S		T	T																T	T	S	S						T
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.				.	.	.
Predicted Secondary structure																																																																												.	.	.
Query SS confidence																																																																												.	.	.
Query Sequence		S	Q	S	D	R	D	T	L	K	N	L	G	D	R	L	K	M	L	V	F	G	Q	D	K	A	I	E	A	L	T	E	A	I	K	M	A	R	A	G	L	G	H	E	H	K	P	V	G	S	F	L	F	A	G	P	T	G	V	G	K	T	E	V	T	V	Q	L	S	K	A	L	G	I	E	.	.	.	L	L	R
Query Conservation																																																																												.	.	.
Alig confidence																																																																												.	.	.
Template Conservation
Template Sequence		L	E	G	E	R	E	K	L	L	R	L	E	E	E	L	H	K	R	V	V	G	Q	D	E	A	I	R	A	V	A	D	A	I	R	R	A	R	A	G	L	K	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	A	K	T	L	A	A	T	L	F	D	T	E	E	A	M	I	R
Template Known Secondary structure		T									S							T	T	S		S																G	G	G	T	S		S	S	S		S						B	S	S	S	S	S	S														S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	M	S	E	Y	M	E	R	H	T	V	S	R	L	I	G	A	P	P	G	Y	V	G	F	D	Q	G	G	L	L	T	D	A	V	I	K	H	P	H	A	V	L	L	L	D	E	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	M	D	N	G	T	L	T	D	N	N	G	R	K	A	D	F	R	N
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	M	T	E	Y	M	E	K	H	A	V	S	R	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	E	A	V	R	R	R	P	Y	S	V	I	L	F	D	E	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	I	L	D	D	G	R	L	T	D	S	H	G	R	T	V	D	F	R	N
Template Known Secondary structure				T	T	T			S	S	G	G	G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S						S	S	G	G	G	S													T	T	T					S	S	S						T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.															.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.		.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	V	L	V	M	T	T	N	A	G	V	R	E	T	E	R	K	S	.	I	G	L	I	H	Q	D	N	S	T	D	A	M	E	E	I	K	K	I	F	T	P	E	F	R	N	R	L	D	N	I	I	W	F	D	H	L	S	T	D	V	I	H	Q	V	V	D	K	F	I	V	E	L	Q	V	Q	L	D	Q	K	G
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		T	V	I	I	L	T	S	N	L	G	S	P	L	I	L	E	G	L	Q	K	G	W	P	Y	E	R	I	R	D	E	V	F	K	V	L	Q	Q	H	F	R	P	E	F	L	N	R	L	D	E	I	V	V	F	R	P	L	T	K	E	Q	I	R	Q	I	V	E	I	Q	L	S	Y	L	R	A	R	L	A	E	K	R
Template Known Secondary structure										T	T										T	T															T	T	T	S							T		S	B			B																										T	T	T
Template Predicted Secondary structure
Template SS confidence
		702	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	L	E	V	S	Q	E	A	R	N	W	L	A	E	K	G	Y	D	R	A	M	G	A	R	P	M	A	R	V	I	Q	D	N	L	K	K	P	L	A	N	E	L	L	F	G	S	L	V	D	G	G	Q	V	T	V	A	L	D	K	E	K	N	E	L	T	Y	G	F	Q	S
Query Conservation
Alig confidence																																																														.	.
Template Conservation																																																														.	.
Template Sequence		I	S	L	E	L	T	E	A	A	K	D	F	L	A	E	R	G	Y	D	P	V	F	G	A	R	P	L	R	R	V	I	Q	R	E	L	E	T	P	L	A	Q	K	I	L	A	G	E	V	K	E	G	D	R	V	Q	V	D	V	G	P	.	.	A	G	L	V	F	A	V	P	A
Template Known Secondary structure																				B	T	T	T	B	T	S										T											T	S	S		T	T									S	.	.	S	S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		782	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.			.	.	.	.	.	.	.	.	850