Job Description P0ABH9 Confidence 95.61% Date Thu Jan 5 11:15:32 GMT 2012 Rank 413 Aligned Residues 137 % Identity 13% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.			.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530						.	.	.	.	.
Predicted Secondary structure																																																				.	.																			.	.	.	.	.
Query SS confidence																																																				.	.																			.	.	.	.	.
Query Sequence		Q	D	K	A	I	E	A	L	T	E	A	I	K	M	A	R	A	G	L	G	H	E	H	K	P	V	G	S	F	L	F	A	G	P	T	G	V	G	K	T	E	V	T	V	Q	L	S	K	A	L	.	.	G	I	E	L	L	R	F	D	M	S	E	Y	M	E	R	H	T	V	.	.	.	.	.	S	R	L	I	G
Query Conservation																																																				.	.																			.	.	.	.	.
Alig confidence																																						.	.	.												.	.																			.	.	.	.	.
Template Conservation																																						.	.	.
Template Sequence		I	K	I	V	Y	D	E	L	S	N	L	F	G	G	D	K	E	P	K	V	I	P	D	K	I	P	Y	V	I	M	L	V	G	V	Q	G	.	.	.	T	T	A	G	K	L	A	Y	F	Y	K	K	K	G	F	K	V	G	L	V	G	A	D	V	Y	R	P	A	A	L	E	Q	L	Q	Q	L	G	Q	Q	I	G
Template Known Secondary structure													T	T		S						S		S	S	S	S								S			.	.	.													T	T											S	S															T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.								.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570			.	.	.			.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.																	.	.				.	.
Query SS confidence																					.	.	.	.	.	.	.																	.	.				.	.
Query Sequence		A	P	P	G	Y	V	G	F	D	Q	G	G	L	L	T	D	A	V	I	.	.	.	.	.	.	.	K	H	P	H	A	V	L	L	L	D	E	I	E	K	A	H	.	.	P	D	V	.	.	F	N	I	L	L	Q	V	M	D	N	G	T	L	T	D	N	N	G	R	K	A	D	F	R	N	V	V	L	V	M	T
Query Conservation																					.	.	.	.	.	.	.																	.	.				.	.
Alig confidence				.	.																.	.	.	.	.	.	.																	.	.				.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	.	.	V	Y	G	E	P	G	E	K	D	V	V	G	I	A	K	R	G	V	E	K	F	L	S	E	K	M	E	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	A	A	L	L	E	E	M	K	N	I	Y	E	.	.	.	.	.	.	.	.	.	.	A	I	K	P	D	E	V	T	L	V	I	D
Template Known Secondary structure				.	.					T	T																		T	T		S									S			T	T															.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure				.	.																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.											210	.	.	.	.	.	.	.	.	.	220	.
		605	.	.	.	.	610	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	A	G	V	R	E	T	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	I	G	Q	K	A	Y	D	L
Template Known Secondary structure		G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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