Job Description P0ABH9 Confidence 99.69% Date Thu Jan 5 11:15:32 GMT 2012 Rank 74 Aligned Residues 230 % Identity 14% Template c1fnnB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.																																																				.	.	.	.
Query SS confidence																					.	.	.	.	.	.																																																				.	.	.	.
Query Sequence		D	P	L	I	G	R	E	K	E	L	E	R	A	I	Q	V	L	C	R	.	.	.	.	.	.	R	R	K	N	N	P	L	L	V	G	E	S	G	V	G	K	T	A	I	A	E	G	L	A	W	R	I	V	Q	G	D	V	P	E	V	M	A	D	C	T	I	Y	S	L	D	I	G	S	L	L	A	.	.	.	.
Query Conservation																					.	.	.	.	.	.																																																				.	.	.	.
Alig confidence																					.	.	.	.	.	.																																.	.	.	.	.	.															.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		K	R	L	P	H	R	E	Q	Q	L	Q	Q	L	D	I	L	L	G	N	W	L	R	N	P	G	H	H	Y	P	R	A	T	L	L	G	R	P	G	T	G	K	T	V	T	L	R	K	L	W	E	L	Y	K	D	K	T	.	.	.	.	.	.	T	A	R	F	V	Y	I	N	G	F	I	Y	R	N	F	T	A	I
Template Known Secondary structure		S			T	T																		S		B	S	S										T	T	S	S													T	T	S		.	.	.	.	.	.									T	T	T			S
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
													256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.							.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.																																			.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																								.																																			.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	G	T	K	Y	R	G	D	F	E	K	R	F	K	A	L	L	K	Q	L	E	Q	D	T	.	N	S	I	L	F	I	D	E	I	H	T	I	I	G	A	G	A	A	S	G	G	Q	V	D	A	A	N	L	I	K	P	L	L	S	.	.	.	.	.	.	S	G	K	I	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																								.																																			.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																								.													.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	E	I	A	R	S	L	N	I	P	F	P	R	R	G	L	S	R	D	E	F	L	A	L	L	V	E	H	L	R	E	R	D	L	Y	M	F	L	V	L	D	D	A	F	N	L	.	.	.	.	.	.	.	.	.	A	P	D	I	L	S	T	F	I	R	L	G	Q	E	A	D	K	L	G	A	F	R	I	A
Template Known Secondary structure										T					S	S																		T	T									T	G	G	G	S	.	.	.	.	.	.	.	.	.												T	T						S	S	B
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	S	T	T	Y	Q	E	F	S	N	I	F	E	K	D	R	A	L	A	R	R	F	Q	K	I	D	I	T	E	P	S	I	E	E	T	V	Q	I	I	N	G	L	K	P	K	Y	E	A	H	H	D	V	R	Y	T	A	K	A	V	R	A	A	V	E	L	A	V	K	Y	I	N	D	R	H	L	P	D	K
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		L	V	I	V	G	H	N	D	A	V	L	N	N	L	D	P	S	T	R	G	I	M	G	K	Y	V	I	R	F	S	P	Y	T	K	D	Q	I	F	D	I	L	L	D	R	A	K	A	.	.	G	L	A	E	G	S	Y	S	E	D	I	L	Q	M	I	A	D	I	T	G	A	Q	T	P	L	D	T	N	R	G	D
Template Known Secondary structure							S	S	T					T	S									T	T									B															.	.		B		T	T	S	S													S	B	S	S	T	T		T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	D	V	I	D	E	A	G	A	R	A	R	L	M	P	V	S	K	R	K	K	T	V	N	V	A	D	I	E	S	V	V	A	R	I
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		A	R	L	A	I	D	I	L	Y	R	S	A	Y	A	A	Q	Q	.	N	G	R	K	H	I	A	P	E	D	V	R	K	S	S	K	E	V
Template Known Secondary structure																			.	T	T		S	S
Template Predicted Secondary structure																			.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions