Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABH9
Confidence95.58%DateThu Jan 5 11:15:32 GMT 2012
Rank417Aligned Residues118
% Identity20%Templatec1ewqA_
PDB info PDB header:replication/dnaChain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure taq muts complexed with a heteroduplex2 dna at 2.2 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   206...210.........220......... 230.........240......... 250.........260.........270.........280.
Predicted Secondary structure 









..







..











Query SS confidence 























. .



















. .































Query Sequence  RKNNPLLVGESGVGKTAIAEGLAW. . RIVQGDVPEVMADCTIYSLD. . IGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI
Query Conservation   
 
 



 





 

  

 .. 
    

  
    
  

..   
 
     

 
  
  
          
Alig confidence 























..



















..


























..


Template Conservation       











 

 


  





  


  
 
   
 







 


  

 
   

  

 .. 

Template Sequence  AHELVLITGPNXAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGAGKSTFXVEXEEVALILKEATE. . NSL
Template Known Secondary structure  SS
S
SSSSTTT

BSSS


S




S

T..T
Template Predicted Secondary structure 
































..

Template SS confidence 















































































   575....580.........590.........600.........610.........620.........630.........640......... 650..
 
   282.......290.........300.........310.........320.........
Predicted Secondary structure 














Query SS confidence 















































Query Sequence  LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSN
Query Conservation 





  
   
            
   
 

 
 

 


  
   
Alig confidence 




....






































Template Conservation 




....






 

 


 



 
       




  

  
Template Sequence  VLLDE. . . . VGRGTSSLDGVAIATAVAEALHERRAYTLFATHYFELTA
Template Known Secondary structure  S....TTTTS
T



T
Template Predicted Secondary structure 
....











Template SS confidence 















































   659660... ......670.........680.........690.........700..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions