Job Description P0ABH9 Confidence 96.28% Date Thu Jan 5 11:15:32 GMT 2012 Rank 358 Aligned Residues 93 % Identity 20% Template c1a1vA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:protein (ns3 protein); PDBTitle: hepatitis c virus ns3 helicase domain complexed with single2 stranded sdna Resolution 2.20 Å

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		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520				.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.		540	.	.	.													.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure																																	.	.	.																				.					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.																				.					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	F	L	F	A	G	P	T	G	V	G	K	T	E	V	T	V	Q	L	S	K	A	L	G	I	E	L	L	R	F	D	.	.	.	M	S	E	Y	M	E	R	H	T	V	S	R	L	I	G	A	P	P	G	.	Y	V	G	F	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	G	G	L	L	T	D	A	V
Query Conservation																																	.	.	.																				.					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.																				.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	H	L	H	A	P	T	G	S	G	K	S	T	K	V	P	A	A	Y	A	A	Q	G	Y	K	V	L	V	L	N	P	S	V	A	A	T	L	G	F	G	A	Y	M	S	K	A	H	G	V	D	P	N	I	R	T	G	V	R	T	I	T	T	G	S	P	I	T	Y	S	T	Y	G	K	F	L	A	D	G	G
Template Known Secondary structure									T	T	S		T	T	T								T	T	T								S																	S								S	S								S												T	T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	H	P	H	A	V	L	L	L	D	E	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	M	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	G	A	Y	D	I	I	I	C	D	E	C	H	S	T	D	A	T	S	I	L	G	I	G	T	V	L	D
Template Known Secondary structure							S						T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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