Job Description P31135 Confidence 1.72% Date Thu Jan 5 11:47:19 GMT 2012 Rank 68 Aligned Residues 155 % Identity 17% Template c3mkuA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:multi antimicrobial extrusion protein (na(+)/drug PDBTitle: structure of a cation-bound multidrug and toxin compound extrusion2 (mate) transporter Resolution 4.20 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	F	K	L	W	L	S	Q	L	Q	M	K	H	G	R	K	L	V	I	A	L	P	Y	I	W	L	I	L	L	F	L	L	P	F	L	I	V	F	K	I	S	L	A	E	M	A	R	A	I	P	P	Y	T	E	L	M	E	W	A	D	G	Q	L	S	I	T	L	N	L	G	N	F	L	Q	L	T	D	D	P
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	Q	D	T	K	G	A	A	I	A	A	N	V	G	L	M	T	G	L	A	T	A	C	I	T	A	L	L	T	V	L	F	R	E	Q	I	A	L	L	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	Q
Template Known Secondary structure		G	S	S				T	T	T	T																														T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.																																				.	350	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	F	D	A	Y	L	Q	S	L	Q	V	A	A	I	S	T	F	C	C	L	L	I	G	Y	P	L	A	W	A	V	A	H	S	K	P	S	T	R	N	I	L	L	L	L	V	I	L	P	S	W	T	S	F	L	I	R	V	Y	A	W	M	G	I	L	K	N	N	G	V	L	N	N	F	L	L	W	L	G	V
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	V	A	L	A	M	Q	L	L	L	F	A	A	I	Y	Q	C	M	D	A	V	Q	V	V	A	A	G	S	L	R	G	Y	K	D	M	T	A	I	F	H	R	T	F	I	S	Y	W	V	L	G	L	P	T	G	Y	I	L	G	M	T	N	W	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T																													G	G	G	S	S																												S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	Q	P	L	T	I	L	H	T	N	L	A	V	Y	I	G	I	V	Y	A	Y	V	P	F	M	V	L	P	I	Y	T	A	L	I	R	I	D	Y	S	L	V	E	A	A	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	E	Q	P	L	G	A	K	G	F	W	L	G	F	I	I	G	L	S	A	A	A	L	M	L	G	Q	R	L	Y	W	L	Q	K	Q	S	D	D	V	Q	L	H	L	A	A	K
Template Known Secondary structure		.			S																					T	G	G	G	S	T	T	T			S	S		T	T	T	T	T	S	S
Template Predicted Secondary structure		.
Template SS confidence
			417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions