Job Description P0AFM2 Confidence 46.84% Date Thu Jan 5 11:26:43 GMT 2012 Rank 145 Aligned Residues 109 % Identity 16% Template d2hava1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.70

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	N	P	V	Q	S	T	I	T	E	E	T	F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	G	V	F
Query Conservation
Alig confidence																								.	.	.	.																															.	.	.	.										.
Template Conservation																								.	.	.	.																															.	.	.	.										.
Template Sequence		P	V	K	W	C	A	L	S	H	H	E	R	L	K	C	D	E	W	S	V	N	S	.	.	.	.	V	G	K	I	E	C	V	S	A	E	T	T	E	D	C	I	A	K	I	M	N	G	E	A	D	A	M	S	L	D	.	.	.	.	G	G	F	V	Y	I	A	G	K	.	C	G	L	V	P	V	L	A	E	N
Template Known Secondary structure									S															.	.	.	.	T	T	S							S	S											T	S								.	.	.	.										.	T	T
Template Predicted Secondary structure																								.	.	.	.																															.	.	.	.										.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.					.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.
		110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	G	A	A	Q	.	.	.	.	.	.	.	.	.	.	.	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W
Query Conservation								.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	N	K	S	D	N	C	E	D	T	P	E	A	G	Y	F	A	V	A	V	V	K	K	S	A	.	.	.	.	S	D	L	T	W	D	N	L	K	G	K	K	S	C	H	T	.	.	.	.	.	.	.	.	.	.	A	V	G	R	T	A	G	W
Template Known Secondary structure			S	S	T	T	S	G	G	G														T	T	S	.	.	.	.	S	S			G	G	G		T	T						S	.	.	.	.	.	.	.	.	.	.		T	T		T	T	T	T
Template Predicted Secondary structure																											.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.					.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.											.	.	.	.	.	.	.	460

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions