Job Description P0AFM2 Confidence 94.52% Date Thu Jan 5 11:26:43 GMT 2012 Rank 57 Aligned Residues 144 % Identity 11% Template d2a5sa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.											.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	.	.	.	.	.	.	.	.	.	.	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	G	V	F	V	N	G
Query Conservation																						.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.
Template Sequence		F	C	I	D	I	L	K	K	L	S	R	T	V	K	F	T	Y	D	L	Y	L	V	T	N	G	K	H	G	K	K	V	N	N	V	W	N	G	M	I	G	E	V	V	Y	Q	R	A	V	M	A	V	G	S	L	T	I	N	E	E	R	S	.	.	.	.	.	.	.	.	E	V	V	D	F	S	V	P	F	V	E
Template Known Secondary structure															T										S	S	S	S					T	T											T	T	S		S				S	S		B							.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Q	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W	G	C	E	G	A	I	N	H	Q	L	A	A	Y	E	L	T	N	T	V	T	H	N	Q	G	N	Y	A	A	M	M	A
Query Conservation
Alig confidence														.	.	.																.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation														.	.	.																.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Sequence		T	G	I	S	V	M	V	S	R	Q	V	T	.	.	.	G	L	S	D	K	K	F	Q	R	P	H	D	Y	S	P	.	.	.	.	.	.	.	.	.	P	F	R	F	G	T	V	P	N	G	S	T	E	R	N	I	R	N	N	Y	P	Y	M	H	Q	Y	M	T	R	F	N	Q	R	G	.	.	.	.	.	V	E
Template Known Secondary structure														.	.	.	S	T	T	S					S	G	G	G	S	S	S	.	.	.	.	.	.	.	.	.								T	T	S								T	T									G	G	G			S	S	.	.	.	.	.
Template Predicted Secondary structure														.	.	.																.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	I	S	R	Y	K	E	G	K	P	V	F	Y	Y	T	W	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	L	V	S	L	K	T	G	K	L	D	A	F	I	Y	D	A	A
Template Known Secondary structure									T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions