Job Description P0AFM2 Confidence 78.49% Date Thu Jan 5 11:26:43 GMT 2012 Rank 104 Aligned Residues 203 % Identity 13% Template d1utha_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.2

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		D	L	P	G	K	G	I	T	V	N	P	V	Q	S	T	I	T	E	E	T	F	Q	T	L	L	V	S	R	A	L	E	K	L	.	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K
Query Conservation																																			.
Alig confidence																																			.						.																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.																												.	.	.	.	.	.	.	.	.	.
Template Sequence		D	P	F	A	S	T	R	T	F	N	L	A	M	T	D	I	G	E	M	Y	F	M	P	P	L	M	E	A	L	A	Q	R	A	P	H	I	Q	I	S	.	T	L	R	P	N	A	G	N	L	K	E	D	M	E	S	G	A	V	D	L	A	L	G	L	L	P	E	.	.	.	.	.	.	.	.	.	.	L	Q	T
Template Known Secondary structure			T	T	T																														T	T					.				T	T	S	S									T	S									T	T	.	.	.	.	.	.	.	.	.	.			T
Template Predicted Secondary structure																																									.																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.											.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	Y	R	E	G	V	F	V	N	G	A	A	Q	G	Y	L	I	D	K	K	T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W	G	C	E	G	A	I	N	H	Q	L	A	A	Y	E	L	T	N	T	V	T
Query Conservation
Alig confidence												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	F	Q	R	R	L	F	R	H	.	.	R	Y	V	C	M	F	R	K	D	H	P	S	A	K	S	P	M	S	L	K	Q	F	S	E	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	G	V	V	A	L	N	T	G	H	G	E	V	D	G	L	L	E	R	A	G	I	K	R	R	M	R
Template Known Secondary structure		T										.	.								T	T		S	S			S	S									S		.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S	G	G	G	G								T	T
Template Predicted Secondary structure												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.															.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	Q	G	N	Y	A	A	M	M	A	D	T	I	S	R	Y	K	E	G	K	P	V	F	Y	Y	T	W	T	P	Y	W	V	S	N	E	L	K	P	G	K	D	V	V	W	L	Q	V	P	F	S	A	L	P	G	D	K	N	A	D	T	K	L	P	N	G	A	N	Y	G	F	P	V	S	T	M	H	I	V	A
Query Conservation
Alig confidence												.	.	.	.												.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.												.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	V	P	H	F	I	A	I	G	.	.	.	.	P	I	L	H	S	T	D	L	I	A	T	.	.	.	V	P	Q	R	F	A	V	R	C	E	V	P	F	G	L	T	T	S	P	H	P	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	D	I	A	I	N	L	F	W
Template Known Secondary structure					S	S	S	T	T			.	.	.	.					T	S	S		B			.	.	.										T	T	T	T	T							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.												.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.																				.	.	270	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	A	W	A	E	K	N	P	A	A	A	K	L	F	A	I	M
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		H	A	K	.	Y	N	R	D	P	G	N	M	W	L	R	Q	L	F
Template Known Secondary structure			G	G	.	G	T	T
Template Predicted Secondary structure					.
Template SS confidence
		278	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions